Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2112 86.0 6e-15 >seq2112 Length=2039691 Score = 86.0 bits (94), Expect = 6e-15 Identities = 130/178 (73%), Gaps = 9/178 (5%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT--TTGCTCGAATACATTACCATG 70 |||||||||||||||||||| | |||||| | || | ||| | |||| |||| Sbjct 829247 TTTACTTTGAAAAAATTAGAATGCTCAAAGGATGCTTGATTGTTTTAATAGTCGTGCATG 829306 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 | ||||||||||||| || || |||||||| || ||||| | | | ||||||| Sbjct 829307 AATTAATAGAATAGGAAGT-CGTCTCTATTTT-TAT-TTTCTGAAATCATCT-TAATGAT 829362 Query 131 AAATACGGA---TAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 |||| ||| |||||||||| | |||||||| | | |||||||||||||||| Sbjct 829363 TAATAGGGACGATAGTCGGGGGCATTTGTATTCAAACGATAGAGGTGAAATTCTTGGA 829420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511965780960