Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= AAMG01001545.1 Length=359 Score E Sequences producing significant alignments: (Bits) Value seq48129 206 6e-51 >seq48129 Length=8357 Score = 206 bits (228), Expect = 6e-51 Identities = 216/281 (77%), Gaps = 6/281 (2%) Strand=Plus/Minus Query 3 AAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAATAC 62 || |||| | |||| ||||| | ||||||||| || ||||||||||| |||||||||||| Sbjct 5794 AACTTCGACTCCTGACGCAGAGACGGCAGGATATTAACGTTCGGCGATGCCTTGGAATAC 5735 Query 63 ATGTAGCACACGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGCCA 122 |||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 5734 ATGTAGCAGGCGTAACCACTGCAATAACCGCAGAAGTTGCACGGGCCCATCTGCGCGCCG 5675 Query 123 TAGGGGTTGGTGTACGGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAACCG 182 |||| ||||||||||| || ||||| ||||| || ||||||| ||| || | || || Sbjct 5674 TAGGTATTGGTGTACGGACCAGAGGTGTTGGCTGAAGGCAGGTCGTAAGGATGATACCCC 5615 Query 183 ACCTCGGCAGCGGCTTTCTGAAACAGCTGTGCGGAGACGGTGTTTTTCTGCGATTCC--A 240 || | || || | ||||||||| || || ||| ||| |||| || | Sbjct 5614 ACGGACTCCGCCGCCTGAGCAAACAGCTGGGCAGAATAGGTACGTTTTTGCG---CCGGA 5558 Query 241 AG-GGGAACGGGTTGGAGCGGTCCGGGGCATACGGGTTGCC 280 || || || | ||||||||| || ||| ||||||| || Sbjct 5557 AGCGGAAATTTATCGGAGCGGTCAGGCGCAAACGGGTTACC 5517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1044945022656