Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq7931 140 8e-31 >seq7931 Length=164496 Score = 140 bits (154), Expect = 8e-31 Identities = 276/400 (69%), Gaps = 9/400 (2%) Strand=Plus/Minus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 |||| ||||||| ||||| ||||| | ||||||||||||||||| |||||||| || Sbjct 31835 CGATAGTCAGCAGTTCGCCACCCACTTCCGTCCACGCCAGGCCAGTCACCTGACCTACGC 31776 Query 61 GATCCT-GCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGG 119 | | | | || || || ||||||| || ||| ||||||| || ||| | |||| Sbjct 31775 GGTTTTCGGTG-TCAGCACGGCCGTAATCGACTTTCTGCACGCCCAGATAGTCTTTCAGG 31717 Query 120 GAGTCGGCCGTGACCTTCACCGAGA---AGCGTTTT-TCCAGC-GCATGTTCCTTGACCG 174 |||| | ||| || | | || ||||| |||||| ||| | | || |||| Sbjct 31716 TTGTCGCCGTTGATAA-CAATGTGCTTCAGGGTTTTATCCAGCAGCA-GCTGTTTCACCG 31659 Query 175 CCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGT 234 | || || || | || | || | ||| ||||| | ||| ||||| || || || || | Sbjct 31658 CTTTACGACACAGTTTGGAAATTTCGCGTTCCAGACTACGAACACCCGCCTCACGAGTAT 31599 Query 235 AGTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGC 294 || |||||| ||| || || | || |||||| | |||| |||||||| Sbjct 31598 AGAAGCGGATAATGCCGATAATGGCGCTATCTTCAACGGTCAGCTCGTTTTTCTTCAGCG 31539 Query 295 CATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTT 354 | || | || || || ||| |||| || |||||||||| | ||| ||||||| Sbjct 31538 CGTTACGCTCGATTTGTTTCGGCAACAGGTGCTGTTTGGCGATGTTCAGCTTTTCGTCTT 31479 Query 355 CGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||| ||||||| ||| |||||||||||||| ||||| || Sbjct 31478 CGGTATAACCCGACAGACGAATCACTTCCATACGGTCAAG 31439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156789291136