Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq31909 214 5e-53 >seq31909 Length=71477 Score = 214 bits (236), Expect = 5e-53 Identities = 326/474 (69%), Gaps = 48/474 (10%) Strand=Plus/Minus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 |||||||| |||||||| || || || || |||| ||||||||||| || |||||||| Sbjct 5319 ATCAGGAAGACTTCACGTGCGCCTGCACCTTGGGCAGATTCACGGATTGCGCGACGCTCA 5260 Query 63 ACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 122 |||||||| | | ||| || || | | ||| || ||||| || ||| ||| ||| Sbjct 5259 ACCTGGGTCGCACCGACCGGTACACAAACTAACACGCGCGGGCTTGGGCGCATGAAGCTG 5200 Query 123 TTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCG 182 || |||||||| ||||| |||| |||||||| || ||| ||| |||||||||| Sbjct 5199 TTGCTGTGAACCTGTTTGATAAAGTGTTGCAGCATTTTTTCGGTCACGAAGAAGTCGGCG 5140 Query 183 ATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCAT- 241 || |||||||||||||| |||||||| || ||||| |||||||| ||||| || ||||| Sbjct 5139 ATAACGCCGTCTTTCATAGGACGAATAGCTGCAATGTTGCCTGGCGTACGTCCAAGCATC 5080 Query 242 ---------GC--------------------------------GCTTGGCCTCGGTGCCG 260 || | || || ||| || Sbjct 5079 TGTTTTGNAGCGGCAATATTGCCAGGAGTACGACCCAGCATCTGTTTCGCGTCGTGACCA 5020 Query 261 ACGGCAACGACACTTTTCTGATTACCA--TGGGTC----CGAATGGCCACAACCGATGGC 314 || ||| | || ||||| | |||| | || ||||| |||||||| |||||| Sbjct 5019 ACAGCAGCAACGCTTTTAGGTGAACCAGCACGATCCTGACGAATAGCCACAACTGATGGC 4960 Query 315 TCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCA 374 |||||||| ||||| || | | || ||||| ||||| |||||||| |||||||| Sbjct 4959 TCATTCAGCACGATGCCTTGTCCTTTTACATAAATGAGGGTATTGGCAGTACCCAGGTCG 4900 Query 375 ATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGGGGAAAGGA 428 ||||| || ||| ||||||||||||| || | |||||| ||||| ||||||| Sbjct 4899 ATGGACAGGTCGTTGGAAAACATGCCGCGAAATTTCTTAAACATAACGAAAGGA 4846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1351717873344