Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq139029 228 1e-57 >seq139029 Length=6747 Score = 228 bits (252), Expect = 1e-57 Identities = 192/236 (81%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 || ||||| ||| ||||| |||| |||||| ||||||| || | || ||||| ||||| Sbjct 6512 GAAGAGGGTTTCTTGCTTATATGCTTTCAGCAATTATCCCATCTATACATAGCTACCCAG 6571 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | |||| |||||| ||| ||||| |||||||||| | | |||| |||||||||||||| Sbjct 6572 CGATGCTATTGGCATAACAGCTGGTACACCAGAGGTATATACATCTCGGTCCTCTCGTAC 6631 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || | ||| || ||||||||||||| | |||||| | ||||| ||||||||||||| | Sbjct 6632 TAGAGTCAGATCTTCTCAAATTTCCTTCACCCACGGCAGATAGAAACCGAACTGTCTCAC 6691 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGG 237 |||||||| |||||| ||| ||| | ||||||| ||||||||||| ||||||||| Sbjct 6692 GACGTTCTAAACCCAACTCACGTAACACTTTAATCGGCGAACAGCCGAACCCTTGG 6747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779748256056