Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq14905 100 5e-19 seq138919 84.2 4e-14 >seq14905 Length=119551 Score = 100 bits (110), Expect = 5e-19 Identities = 102/132 (77%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155 || ||||| ||||| | |||| | || ||||| ||||| ||||||| | ||| ||||| Sbjct 53255 GCCAGGAACGCTTCCT-GTGGCAACTCGACGTTACCCACCTGCTTCATTCTTTTCTTACC 53197 Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215 | | || || |||| | ||| || ||||||||| ||||||||||||||||| ||||| Sbjct 53196 GTCTTTCTGTTTCTGCAACAGTTTTTTCTTACGGCTAACGTCACCGCCGTAGCACTTGGC 53137 Query 216 CAGTACGTTCTT 227 || ||||| || Sbjct 53136 CAAAACGTTTTT 53125 >seq138919 Length=2157 Score = 84.2 bits (92), Expect = 4e-14 Identities = 82/103 (80%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 113 GTGGAATTTCCACGTTGCCC-ACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCA 171 |||| ||||| | ||||| ||| || |||| | || |||||||| ||||||||||| Sbjct 1892 GTGGGATTTCGATATTGCCGTACT-GCCTCATTCTCTTCTTACCGGCTTTTTGCTTCTCG 1834 Query 172 AGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGG 214 |||||||| |||||||| ||| |||||||| || ||||||| Sbjct 1833 AGCAGCTTACGCTTACGAGTTATATCACCGCCATAACATTTGG 1791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 840466357962