Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq139035 196 9e-48 >seq139035 Length=9387 Score = 196 bits (216), Expect = 9e-48 Identities = 241/323 (75%), Gaps = 16/323 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || |||| || |||||||||||||| | | |||||||||||||||| | || ||||||| Sbjct 8950 AGAGCACTTGATGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATA 9009 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||||| ||| | | | |||| | |||||||||||||||||||||||||||||||| | Sbjct 9010 AGCTGTGGGAAAT-TGTCAACAAATTTTGATCCGCAGATTTCCGAATGGGGAAACCCAAC 9068 Query 121 --CCTTTG--GGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTG 176 ||| | || ||| || |||| || |||| ||||| ||| || |||||| Sbjct 9069 TAGCTTAGCTAGTTATT--AT-----ATAC-TAAGTATATAAAGCAAACTTGGTGAACTG 9120 Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236 ||| ||||||||||| |||||||||||||||||||||||| ||||||| |||||| Sbjct 9121 AAATATCTAAGTAGCCAAAGGAAAAGAAATCAACCGAGATTCTGTTAGTAGTGACGAGCG 9180 Query 237 AAATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAG 296 ||| ||| || || | ||| ||| | | |||| |||||||||| | | Sbjct 9181 AAAGCGGAAAAGGCT---AGTGATTTAAAAATAAGAATTAGAATACTCTGGAAATGGTAA 9237 Query 297 CCATAGCGGGTGATAGCCCCGTA 319 |||||| |||||||| || ||| Sbjct 9238 CCATAGAAGGTGATAGTCCTGTA 9260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917123001536