Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq48654 165 2e-36 >seq48654 Length=89670 Score = 165 bits (182), Expect = 2e-36 Identities = 214/296 (72%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 33619 ACAATTTCTGTGGTGTATTTTTCAACTCCAGCATTATCAGTCCATTTTCTAGTGCGCAAC 33678 || ||||| ||||||||||||||||| || || | ||| ||||| || | || ||| Sbjct 37327 ACGATTTCGGTGGTGTATTTTTCAACACCGGCCTGATCGGTCCACTTACGGGTTTGCAGT 37386 Query 33679 TGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGC 33738 ||||||| |||||| || |||||||| | || || || || || | ||| ||||| Sbjct 37387 GCGCCTTCAATATAAACCTGAGAGCCTTTACGCAGGTATTCGCCCGCGACTTCTGCGAGT 37446 Query 33739 TTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTA 33798 ||||| || | || ||||||||||||||||||| ||| || | ||| || || ||||| Sbjct 37447 TTGCCGAACAACACAACGCGGTGCCATTCAGTTTTCTCTTTCTGCTCGCCGGTCGCCTTG 37506 Query 33799 TCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCATG 33858 || ||| ||| || || || | | | ||||||||||| ||||| || ||||| Sbjct 37507 TCGCGCCAGCTTTCAGAAGTTGCCAGGGTGATATTGGCAACAGCACCGCCGTTAGGCATA 37566 Query 33859 TATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGATTACTTTATTTACGCC 33914 || || ||||| || ||||| || | | || | | || ||||| |||||||| Sbjct 37567 TAGCGGACTTCGGGATCCTGACCCAGATTCCCAACCAGAATCACTTTGTTTACGCC 37622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144733425080608