Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_032157.1 Length=1694 Score E Sequences producing significant alignments: (Bits) Value seq69909 226 3e-56 >seq69909 Length=1495 Score = 226 bits (250), Expect = 3e-56 Identities = 436/642 (68%), Gaps = 6/642 (1%) Strand=Plus/Minus Query 441 ATGCCTACAGGTCAACACCTGTCTAAAACTAATTCCGAATTGAAGAATGATCCTCTTTAT 500 ||||| || || || ||| |||| || || |||||||| |||||||| || | | || Sbjct 1131 ATGCCCACTGGGCAGCACTTGTCGAAGACAAATTCCGACTTGAAGAACGACGCCTTGTAC 1072 Query 501 TTAGAAGCATTTTTTCCA---TCACCTAGCGAAGAGCTAGTTCCGTTGCCTGAAGAGCTC 557 | ||||| ||||||||| ||| || ||||| |||| ||| |||| |||||||| Sbjct 1071 ATGGAAGCTTTTTTTCCAAGCTCATCT---GAAGAACTAGCTCCTGTGCCAGAAGAGCTG 1015 Query 558 AATCATTTTACGGGTTTTGACGGTTTAAGTTCAATAATTAATGAAAGTTATGATAATTTT 617 ||||||| | | |||||||| || |||| ||| | |||||||| |||||||| ||| | Sbjct 1014 AATCATTATCCCGGTTTTGAGGGATTAACATCATTGATTAATGAGAGTTATGAAAATATG 955 Query 618 TGTTCACATAGTTTAAATTTCAAGCGTTCTGTTTCATTATCTAGTTATGCCTATTATATT 677 | | | || ||||||| ||| | ||||| || ||||| |||||| ||||| | Sbjct 954 TCAGCTAAGAGCCTAAATTTTAAGAGATCTGTGTCCTTATCATCTTATGCATATTACGTC 895 Query 678 TCTGTTTTCTGTTGGGCCAGAGTTCTACATTTAAAACGTTTAAATAAATATCGCCTAACG 737 | ||||| ||||||| ||||||| ||||| | |||||||||| || | Sbjct 894 GCCGTTTTTGCATGGGCCACAGTTCTATGGCTAAAAAATAAAAATAAATATAAACTCGAG 835 Query 738 ACAAATGAGATTGAATTTGTCGATATGATTTACAATCAAGGAAATTACTTACTTCCAAAG 797 || ||| || ||| | | ||||||||| | || || ||||| || | || || Sbjct 834 ACGCTAGAGTCAGAGTTTTTAAACATGATTTACGAACAGGGTGATTACGTATTACCTAAA 775 Query 798 TCTGTTACTCTTTATCTTTCTGGCTTTGGTAATTTTACTATTCCATCAAGTGTTGAATCT 857 ||| || | ||| | || || |||| || ||| | || || || | |||||| Sbjct 774 AGTGTCACCATATATTTGTCAGGACTTGGCAACTTTTCAATACCTTCGGGCCCTGAATCG 715 Query 858 AAGTTTAACACAAAGCCGTATTCTTACGATGATGCCGGTTATTTTGTTAATTTTGCTGAA 917 || ||| |||| ||| | ||| || || || | |||| |||| | |||| | Sbjct 714 AAATTTGACACGAAGTCTTATAAGTATGACGAAGATGGTTTCTTTGAGGACTTTGAGAAG 655 Query 918 GAATTTTATACAGTAACGTCCTATCCTTGCATTTCTATATTTGCAGAAAGGATTATGAGA 977 || |||| |||| || || ||||| || |||||||||||| ||||| || Sbjct 654 GACCATTATTTGTGTGCGTCATACCCGATAATTTCGATTTTTGCAGAAAGGGTTATGCGA 595 Query 978 GACATGGCGTTTACTGAGAATAATCGAGTCGGTGAAGCTTGGTCACCTAATGATATCGAG 1037 || || |||| ||| || | || | ||| ||| |||||||||| ||| | || Sbjct 594 GATATCGCGTATACAGAAGACGATAACATAGGTAAAGATTGGTCACCTGATGGAAGGGAA 535 Query 1038 CAAGAATGGAACACTCGGTGTCTAGGATATGCCCCATCCGTA 1079 ||| ||||| ||| ||| | || ||||| ||||||||| Sbjct 534 GCAGATTGGAATCGTCGCTGTATTGGTTATGCTCCATCCGTA 493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5304152243760