Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_033034.1 Length=13000 Score E Sequences producing significant alignments: (Bits) Value seq76293 113 4e-21 >seq76293 Length=3964 Score = 113 bits (124), Expect = 4e-21 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 7957 AATTTTTAAAAGCAATTAATGATGTCGGATTATCCTGGGATGATTTGGTCATCGGACTGA 8016 |||||||||||| | | |||||| || | | ||||| |||||||| ||||| | Sbjct 2933 AATTTTTAAAAGAAGTAAATGATCATGGTATTGAGTTGGATGTATTGGTCATTGGACTAA 2992 Query 8017 AAGAAAAGGAGCGGGAATTGAAAACAGCAGGACGTTTCTTTTCATTAATGTCTTGGAAGC 8076 ||| || || || || |||| | || |||| | | ||||| |||||||| ||| | | Sbjct 2993 AAGGCAAAGAACGAGAGGTGAAGATAGAAGGAAGATATTTTTCTTTAATGTCCTGGGATC 3052 Query 8077 TGAGAGAATATTTTGTAATAACTGAATATCTCATAAAAACCTTTTATGTCCCTCTTTTTT 8136 | ||||| ||||| ||||||| |||||| || ||||| || ||| || | || Sbjct 3053 TAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCATTTTGTTCCCTTATTCA 3112 Query 8137 ATGGATTAACAATGGCTGATGA 8158 | |||||||| ||||||||||| Sbjct 3113 ACGGATTAACTATGGCTGATGA 3134 Score = 80.6 bits (88), Expect = 2e-11 Identities = 112/151 (74%), Gaps = 7/151 (5%) Strand=Plus/Plus Query 8235 GCCAATCACATCGATTATGAGAAATGGAATAACCACCAACG--ACAAGCCTCGACTGGTC 8292 || ||||| || |||||| | |||||||| ||||||||||| |||| || || | Sbjct 3253 GCTAATCATATAGATTATCAAAAATGGAACAACCACCAACGTCTCAAG--TCAACATATG 3310 Query 8293 CTGTATTTAAGGTGATGGGACAATTCTTGGGTTACCCTAATTTAATTTACA-GAACACAC 8351 | | |||||||| |||||||||||| | ||||||| | | | ||||| | ||||| Sbjct 3311 CAATTTTTAAGGTTATGGGACAATTC-TCGGTTACCAAGAACTGA-TTACACGTACACAT 3368 Query 8352 GAATTTTTTGAGAAAAGCCTGATTTATTATG 8382 || || ||||| |||||| ||| || |||| Sbjct 3369 GAGTTCTTTGAAAAAAGCTGGATATACTATG 3399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41419906675616