Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_033070.1 Length=11145 Score E Sequences producing significant alignments: (Bits) Value seq76293 84.2 2e-12 >seq76293 Length=3964 Score = 84.2 bits (92), Expect = 2e-12 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 6154 AATTGGCCCAAGTTTTTGAAACAGGTTAATGACACAGGTATATCAGAAG-ATCATCTGAT 6212 |||||||| | ||||| ||| | || ||||| ||||| | || | || || | Sbjct 2923 AATTGGCCTCAATTTTTAAAAGAAGTAAATGATCATGGTAT-TGAGTTGGATGTATTGGT 2981 Query 6213 CATTGGATTAAGAGCAAAAGAGCGAGAACTTAAAGAAGAAGGAAGGTTCTTTGCACTTAT 6272 ||||||| ||| || ||||| ||||| | || ||||||||| | ||| | | || Sbjct 2982 CATTGGACTAAAAGGCAAAGAACGAGAGGTGAAGATAGAAGGAAGATATTTTTCTTTAAT 3041 Query 6273 GTCTTGGGAAATCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACACTTTGT 6332 ||| ||||| | ||||||||||| | || || || ||| |||||||| || ||||| Sbjct 3042 GTCCTGGGATCTAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCATTTTGT 3101 Query 6333 ACCTCTGTTCAAAGGTCTGACAATGGCAGACGA 6365 || | ||||| || | || ||||| || || Sbjct 3102 TCCCTTATTCAACGGATTAACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35493192167496