Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5780 192 9e-47 >seq5780 Length=8782 Score = 192 bits (212), Expect = 9e-47 Identities = 180/224 (80%), Gaps = 9/224 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| | Sbjct 5017 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 5074 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| | ||||| | | |||| | || Sbjct 5075 CTCGTTCACGGGGAACAATTGCAAGCCCCGATCCCTAGCACGAAGGAGGTTCAGCGGGTT 5134 Query 120 ACCCGGA----CCTGTCGGCCAAGGT--GATAGACTCGTTGAATACATCAGTGTAGCGCG 173 |||||| ||| |||||| || || || || ||| | | ||||||||||||| Sbjct 5135 ACCCGGTAGAGCCTCTCGGCCCGGGAACGAATTACACGCTGATTCCTTCAGTGTAGCGCG 5194 Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||||||||||||||||||||||||||||||||||||||| || Sbjct 5195 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATCGC 5238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751761612945