Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq22166 324 2e-86 seq24994 98.7 2e-18 >seq22166 Length=2410 Score = 324 bits (358), Expect = 2e-86 Identities = 218/243 (90%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 945 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGT 886 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 || |||||||||||||||||||| |||||| ||||||| |||||||||||||||||| Sbjct 885 AAGCGGGTGAACAATCCAACGCTTGGCGAATTTTGCTTCGCAATGATAGGAAGAGCCGAC 826 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 825 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCC 766 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA--TTTCGAGGGACTAAAGGATCGATAG 269 |||||||||||||||| ||||||| || ||| ||| |||| | |||||||| || Sbjct 765 TGTGGTAACTTTTCTGACACCTCTCGCTGAAAACTCTTCAGCGGACGAGAGGATCGAGAG 706 Query 270 GCC 272 ||| Sbjct 705 GCC 703 >seq24994 Length=39917 Score = 98.7 bits (108), Expect = 2e-18 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| |||| || ||||||||||||| ||||||||||||||| || ||||| ||| || Sbjct 32847 AATTTTGCTCCGCAATGATAGGAAGAGACGACATCGAAGGATCGAACAGCAAAGTCATTA 32906 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||| || | ||| |||||||| | || | ||||||||| ||||||| || Sbjct 32907 AGAACGCTCGGTCGACACGAGCCAGTTGCCTGTGCGCCAACTTTTCTCACACCTCTGGC 32965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854120414688