Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5780 197 3e-48 >seq5780 Length=8782 Score = 197 bits (218), Expect = 3e-48 Identities = 178/221 (81%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 5238 GCGATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGG 5179 Query 174 AGCCAACGAGTTCATCA--CCTTGGCCGGAAGG-TCT---GGGTAATCTTGTTAAACTCT 227 | || || || || || ||||| ||| ||| |||||| | | || ||| Sbjct 5178 AATCAGCGTGTAATTCGTTCCCGGGCCGAGAGGCTCTACCGGGTAACCCGCTGAACCTCC 5119 Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 ||||||| ||||| | | |||||||| || | | | |||||||||| || |||||||| Sbjct 5118 TTCGTGCTAGGGATCGGGGCTTGCAATTGTTCCCCGTGAACGAGGAATTCCCAGTAAGCG 5059 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||||||| |||||||||||||||||||||||||||| Sbjct 5058 CGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 5018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946890047744