Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27]
32,723 sequences; 304,570,832 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq5780 280 5e-73
seq22166 230 8e-58
seq9953 87.8 6e-15
>seq5780
Length=8782
Score = 280 bits (310), Expect = 5e-73
Identities = 167/175 (95%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3 AGTAGATAGGGACAGAGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 62
Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||
Sbjct 63 GAGGCATTTGGCTACCTTAAAAGAGTCATAGTTACTCCTGCCGTTTACCCGCGCTTGCTT 122
Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||| |||||||||||||||||||||||||||||||| | |||||||
Sbjct 123 GAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATCGTGTCAACA 177
>seq22166
Length=2410
Score = 230 bits (254), Expect = 8e-58
Identities = 159/179 (89%), Gaps = 1/179 (1%)
Strand=Plus/Minus
Query 234 CGGCTCCCACTTATTCTACACCTCT-CAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292
|||||||||||||| ||||||| | || ||| |||| | | |||| |||||||||
Sbjct 179 CGGCTCCCACTTATGCTACACCCCGGCATGTCTCCGAACAATGCCAGACTGGAGTCAAGC 120
Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 119 TCAACAGGGTCTTCTTTCCCCGCTGATTTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 60
Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411
||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 59 CTAGAAAGTAGATAGGGACAGAGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 1
Score = 109 bits (120), Expect = 2e-21
Identities = 90/110 (82%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| ||| |||| || ||| |||| ||||||||||||||||||||
Sbjct 646 CTTTTGCTCTACGCGAGGTTTCCGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 587
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATC 116
||| |||||||| ||||||||| ||||||||||||||| | |||| ||
Sbjct 586 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCACCTGGCGGTGTCCTC 537
>seq9953
Length=2542
Score = 87.8 bits (96), Expect = 6e-15
Identities = 51/53 (96%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411
||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 2490 AGTAGATAGGGACAGAGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 2542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634664913504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |