Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27]
32,723 sequences; 304,570,832 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq5780 284 4e-74
seq20507 149 2e-33
>seq5780
Length=8782
Score = 284 bits (314), Expect = 4e-74
Identities = 235/283 (83%), Gaps = 4/283 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||| ||||| | || | || ||| || ||||| ||||| | |||||||||
Sbjct 6699 GTACTCATTCCGATTACGGGGCCTCGAATGAGTCCCGTATCGTTATTTTTCGTCACTACC 6758
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||| | |||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 6759 TCCCCGAGCTGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGT 6818
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||
Sbjct 6819 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACCACCACGGT 6878
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| | | |||||| |||| |||||||| |||||| ||||||| || | |||||||
Sbjct 6879 AGGCGTCGAACCTACCGTCGACAGTTGATAAGGCAGACATTTGAAAGATACGTCGCCGGT 6938
Query 240 TC-AAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA 279
| ||| || |||||| | | |||||||| || |||||||
Sbjct 6939 ACGAAGACCGTGCGATCAGCTCGAAGTTATTCAGAGTCACCAA 6981
Score = 196 bits (216), Expect = 1e-47
Identities = 144/164 (88%), Gaps = 4/164 (2%)
Strand=Plus/Plus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAA 401
|||||||||||||||||||||||||| |||||||| ||| || ||||| ||| || |
Sbjct 7135 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTG-GGTACGATCTAAGGA 7193
Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGA 460
|| ||||||||||||||||||| ||||| ||||||| ||| |||| |||| ||| |||
Sbjct 7194 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCGTACTAGACGGCTTGCACTGAGA 7253
Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7254 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 7297
>seq20507
Length=42668
Score = 149 bits (164), Expect = 2e-33
Identities = 116/137 (85%), Gaps = 1/137 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||| |||||| | || | || ||| |||||||| ||||| | ||||||||
Sbjct 25433 GTACTCATTCGGATTACAGGGCCTCGAATGAGTCCTGTATCGTTATTTTTCATCACTACC 25492
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||| | |||| |||||||||||||| |||||||||||||||||||||| ||||| |
Sbjct 25493 TCCCCGAGCTGGGAGTGGGTAATTTGCGCACCTGCTGCCTTCCTTGGATGTGATAGCCTT 25552
Query 120 TTCTCAGGCTCCCTCTC 136
|||||| ||||||||||
Sbjct 25553 TTCTCAAGCTCCCTCTC 25569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509905751808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |