Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq31824 120 2e-22 >seq31824 Length=40797 Score = 120 bits (132), Expect = 2e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || |||||||| || || || || || |||||| ||||||| || ||||| || || Sbjct 11066 TTATTCAATGCTATTGAAACTATGCCTTGTGTGAAGAGGAAAGCAGACTGGGCGTTGAAA 11007 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||||| || | || ||||||||||| ||| || | | |||||||| | ||||| Sbjct 11006 TGGATAGCCGATCAAAATGCTACATTTGGGGAAAGAATTATCGCATTTGCAGCCGTCGAA 10947 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || | || || |||| ||||| || || |||||| | ||||| | || |||||| Sbjct 10946 GGAATTTTCTTTTCTGGAAGTTTTGCAGCGATATTTTGGCTAAAGAAGAGAGGCCTTATG 10887 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 || || |||| ||||||||||| ||||| ||| | || || Sbjct 10886 CCTGGGTTGACTTTCAGCAATGAATTGATTTCAAGAGATGA 10846 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 61195 TTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTA 61254 |||||| ||| |||||||| || || || ||||| ||||||||||| || || ||| | Sbjct 11343 TTCATTTCACACGTGTTGGCATTTTTCGCTGCTTCTGACGGTATCGTGAACGAAAATCTT 11284 Query 61255 TTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAG 61314 | ||||||||| || || || || | | || || | | ||| ||||| || || Sbjct 11283 GTCGAACGTTTCTTTCAAGAAGTCCAGATTCCTGAAGCCAGATTTTTTTACGGATTTCAA 11224 Query 61315 ATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGG 61374 || |||| |||||||| || ||||| ||||| || | | || || || ||||| | | Sbjct 11223 ATCACCATAGAGAATGTACATTCGGAAATGTATAGCTTATTGATAGACACTTACATTAAG 11164 Query 61375 GA 61376 || Sbjct 11163 GA 11162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397409445284720