Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2 201 2e-49 seq1 201 2e-49 >seq2 Length=19542282 Score = 201 bits (222), Expect = 2e-49 Identities = 205/259 (79%), Gaps = 10/259 (4%) Strand=Plus/Minus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATAC 122 ||||| || ||||||||||||||||| ||||| ||||||||||| | || ||| | Sbjct 8187172 GCCAGCACGTTTACTTTGAAAAAATTGGAGTGCTCAAAGCAGGCGCTACAGCCTGAA--C 8187115 Query 123 ATTAG--CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC-C 179 ||||| ||||||||||| |||||||| | ||||||||||| ||||| || | ||| | Sbjct 8187114 ATTAGTGCATGGAATAATGGAATAGGATCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTC 8187057 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 | ||||||||||||||||| || |||||| | ||| | || |||||||||||| Sbjct 8187056 GAGGTAATGATTAATAGGGACAGACGGGGGCATTCGTACTGCGACGTTAGAGGTGAAATT 8186997 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 ||||||| ||||| ||||||||||||||| || ||||| ||||||||||||||| Sbjct 8186996 CTTGGATCGTCGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATC 8186937 Query 300 AGTGAACGAAAGTTAGGGG 318 | ||||||||||||| || Sbjct 8186936 A-AGAACGAAAGTTAGAGG 8186919 >seq1 Length=28534321 Score = 201 bits (222), Expect = 2e-49 Identities = 205/259 (79%), Gaps = 10/259 (4%) Strand=Plus/Minus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATAC 122 ||||| || ||||||||||||||||| ||||| ||||||||||| | || ||| | Sbjct 8290146 GCCAGCACGTTTACTTTGAAAAAATTGGAGTGCTCAAAGCAGGCGCTACAGCCTGAA--C 8290089 Query 123 ATTAG--CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC-C 179 ||||| ||||||||||| |||||||| | ||||||||||| ||||| || | ||| | Sbjct 8290088 ATTAGTGCATGGAATAATGGAATAGGATCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTC 8290031 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 | ||||||||||||||||| || |||||| | ||| | || |||||||||||| Sbjct 8290030 GAGGTAATGATTAATAGGGACAGACGGGGGCATTCGTACTGCGACGTTAGAGGTGAAATT 8289971 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 ||||||| ||||| ||||||||||||||| || ||||| ||||||||||||||| Sbjct 8289970 CTTGGATCGTCGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATC 8289911 Query 300 AGTGAACGAAAGTTAGGGG 318 | ||||||||||||| || Sbjct 8289910 A-AGAACGAAAGTTAGAGG 8289893 Score = 174 bits (192), Expect = 3e-41 Identities = 202/259 (78%), Gaps = 14/259 (5%) Strand=Plus/Plus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATAC 122 ||||| || |||||||||||||||| ||||| ||||||||||| | || ||| | Sbjct 8288817 GCCAGCACGTTTACTTTGAAAAAATG-GAGTGCTCAAAGCAGGCGCTACAGCCTGAA--C 8288873 Query 123 ATTAG--CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC-C 179 ||||| ||||||||||| |||||||| | ||||||||||| ||||| || | ||| | Sbjct 8288874 ATTAGTGCATGGAATAATGGAATAGGATCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTC 8288931 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 | ||||||||||||||| | || ||||| || ||| | || |||||||||||| Sbjct 8288932 GAGGTAATGATTAATAGG-ACAGACGGGGCATTC-GTACTGCGACGTTAGAGGTGAAATT 8288989 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 ||||||| ||||| ||||||||||||||| || ||||| ||| ||||||||||| Sbjct 8288990 CTTGGATCGTCGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATG-TTTCATTAATC 8289048 Query 300 AGTGAACGAAAGTTAGGGG 318 | ||||||||||||| || Sbjct 8289049 A-AGAACGAAAGTTAGAGG 8289066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198517376