Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12]
162 sequences; 221,702,752 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq2 201 2e-49
seq1 201 2e-49
>seq2
Length=19542282
Score = 201 bits (222), Expect = 2e-49
Identities = 205/259 (79%), Gaps = 10/259 (4%)
Strand=Plus/Minus
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATAC 122
||||| || ||||||||||||||||| ||||| ||||||||||| | || ||| |
Sbjct 8187172 GCCAGCACGTTTACTTTGAAAAAATTGGAGTGCTCAAAGCAGGCGCTACAGCCTGAA--C 8187115
Query 123 ATTAG--CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC-C 179
||||| ||||||||||| |||||||| | ||||||||||| ||||| || | ||| |
Sbjct 8187114 ATTAGTGCATGGAATAATGGAATAGGATCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTC 8187057
Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239
| ||||||||||||||||| || |||||| | ||| | || ||||||||||||
Sbjct 8187056 GAGGTAATGATTAATAGGGACAGACGGGGGCATTCGTACTGCGACGTTAGAGGTGAAATT 8186997
Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299
||||||| ||||| ||||||||||||||| || ||||| |||||||||||||||
Sbjct 8186996 CTTGGATCGTCGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATC 8186937
Query 300 AGTGAACGAAAGTTAGGGG 318
| ||||||||||||| ||
Sbjct 8186936 A-AGAACGAAAGTTAGAGG 8186919
>seq1
Length=28534321
Score = 201 bits (222), Expect = 2e-49
Identities = 205/259 (79%), Gaps = 10/259 (4%)
Strand=Plus/Minus
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATAC 122
||||| || ||||||||||||||||| ||||| ||||||||||| | || ||| |
Sbjct 8290146 GCCAGCACGTTTACTTTGAAAAAATTGGAGTGCTCAAAGCAGGCGCTACAGCCTGAA--C 8290089
Query 123 ATTAG--CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC-C 179
||||| ||||||||||| |||||||| | ||||||||||| ||||| || | ||| |
Sbjct 8290088 ATTAGTGCATGGAATAATGGAATAGGATCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTC 8290031
Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239
| ||||||||||||||||| || |||||| | ||| | || ||||||||||||
Sbjct 8290030 GAGGTAATGATTAATAGGGACAGACGGGGGCATTCGTACTGCGACGTTAGAGGTGAAATT 8289971
Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299
||||||| ||||| ||||||||||||||| || ||||| |||||||||||||||
Sbjct 8289970 CTTGGATCGTCGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATC 8289911
Query 300 AGTGAACGAAAGTTAGGGG 318
| ||||||||||||| ||
Sbjct 8289910 A-AGAACGAAAGTTAGAGG 8289893
Score = 174 bits (192), Expect = 3e-41
Identities = 202/259 (78%), Gaps = 14/259 (5%)
Strand=Plus/Plus
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATAC 122
||||| || |||||||||||||||| ||||| ||||||||||| | || ||| |
Sbjct 8288817 GCCAGCACGTTTACTTTGAAAAAATG-GAGTGCTCAAAGCAGGCGCTACAGCCTGAA--C 8288873
Query 123 ATTAG--CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC-C 179
||||| ||||||||||| |||||||| | ||||||||||| ||||| || | ||| |
Sbjct 8288874 ATTAGTGCATGGAATAATGGAATAGGATCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTC 8288931
Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239
| ||||||||||||||| | || ||||| || ||| | || ||||||||||||
Sbjct 8288932 GAGGTAATGATTAATAGG-ACAGACGGGGCATTC-GTACTGCGACGTTAGAGGTGAAATT 8288989
Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299
||||||| ||||| ||||||||||||||| || ||||| ||| |||||||||||
Sbjct 8288990 CTTGGATCGTCGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATG-TTTCATTAATC 8289048
Query 300 AGTGAACGAAAGTTAGGGG 318
| ||||||||||||| ||
Sbjct 8289049 A-AGAACGAAAGTTAGAGG 8289066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915198517376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |