Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2 241 2e-61 seq1 190 3e-46 >seq2 Length=19542282 Score = 241 bits (266), Expect = 2e-61 Identities = 208/252 (83%), Gaps = 8/252 (3%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 8186425 TCCTTCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 8186484 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAACC 128 | |||| || | |||| | ||| ||||||||||||||| | ||| || Sbjct 8186485 C-TCAATCT-CGTGCGGCTAAACGCCGCCCGTCCCTCTAAGAAGCTGCGATAGACCCACA 8186542 Query 129 ATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186 | | || | | ||| |||| ||| | |||||||||||||||||||||||||||| Sbjct 8186543 AAGGGATCTAACGT-CTAGTTAGTAGGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGA 8186601 Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246 |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 8186602 CAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGC 8186661 Query 247 TATCAATCTGTC 258 | |||||||||| Sbjct 8186662 TCTCAATCTGTC 8186673 >seq1 Length=28534321 Score = 190 bits (210), Expect = 3e-46 Identities = 177/219 (81%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 45 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTC 104 |||||||||||||||||||||||||||| |||| || | |||| | ||| ||| Sbjct 8289432 TCTAAGGGCATCACAGACCTGTTATTGC-TCAATCT-CGTGCGGCTAAACGCCGCCCGTC 8289489 Query 105 CCTCTAAGAAGCC---AGCCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGG 159 |||||||||||| | ||| || | | || | | ||| |||| ||| | | Sbjct 8289490 CCTCTAAGAAGCTGCGATAGACCCACAAAGGGATCTAACGT-CTAGTTAGTAGGCCAGAG 8289548 Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 8289549 TCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCA 8289608 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||| |||||||||||||||| |||||||||| Sbjct 8289609 CCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 8289647 Score = 132 bits (146), Expect = 8e-29 Identities = 93/101 (92%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 159 GTCTCGTTCGTT-ATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 |||||||||||| |||||| ||||||||||||||| ||||||| |||||||||||||||| Sbjct 8289405 GTCTCGTTCGTTTATCGGA-TTAACCAGACAAATCGCTCCACC-ACTAAGAACGGCCATG 8289348 Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||| ||| |||||||||||||||| |||||||||| Sbjct 8289347 CACCACCA-CCACCGAATCAAGAAAGAGCTCTCAATCTGTC 8289308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798749522