Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12]
162 sequences; 221,702,752 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq2 241 2e-61
seq1 190 3e-46
>seq2
Length=19542282
Score = 241 bits (266), Expect = 2e-61
Identities = 208/252 (83%), Gaps = 8/252 (3%)
Strand=Plus/Plus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 8186425 TCCTTCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 8186484
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAACC 128
| |||| || | |||| | ||| ||||||||||||||| | ||| ||
Sbjct 8186485 C-TCAATCT-CGTGCGGCTAAACGCCGCCCGTCCCTCTAAGAAGCTGCGATAGACCCACA 8186542
Query 129 ATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186
| | || | | ||| |||| ||| | ||||||||||||||||||||||||||||
Sbjct 8186543 AAGGGATCTAACGT-CTAGTTAGTAGGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGA 8186601
Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 8186602 CAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGC 8186661
Query 247 TATCAATCTGTC 258
| ||||||||||
Sbjct 8186662 TCTCAATCTGTC 8186673
>seq1
Length=28534321
Score = 190 bits (210), Expect = 3e-46
Identities = 177/219 (81%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 45 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTC 104
|||||||||||||||||||||||||||| |||| || | |||| | ||| |||
Sbjct 8289432 TCTAAGGGCATCACAGACCTGTTATTGC-TCAATCT-CGTGCGGCTAAACGCCGCCCGTC 8289489
Query 105 CCTCTAAGAAGCC---AGCCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGG 159
|||||||||||| | ||| || | | || | | ||| |||| ||| | |
Sbjct 8289490 CCTCTAAGAAGCTGCGATAGACCCACAAAGGGATCTAACGT-CTAGTTAGTAGGCCAGAG 8289548
Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 8289549 TCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCA 8289608
Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||| |||||||||||||||| ||||||||||
Sbjct 8289609 CCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 8289647
Score = 132 bits (146), Expect = 8e-29
Identities = 93/101 (92%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTT-ATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217
|||||||||||| |||||| ||||||||||||||| ||||||| ||||||||||||||||
Sbjct 8289405 GTCTCGTTCGTTTATCGGA-TTAACCAGACAAATCGCTCCACC-ACTAAGAACGGCCATG 8289348
Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||| ||| |||||||||||||||| ||||||||||
Sbjct 8289347 CACCACCA-CCACCGAATCAAGAAAGAGCTCTCAATCTGTC 8289308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796798749522
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |