Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-20 seq1 104 2e-20 >seq2 Length=19542282 Score = 104 bits (114), Expect = 2e-20 Identities = 139/186 (75%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CT-TTGCTCGAATACA 62 |||| || ||||||||||||||||| ||| | ||||||||||| || || || ||| Sbjct 8187171 CCAGCACGTTTACTTTGAAAAAATTGGAGTGCTCAAAGCAGGCGCTACAGCCTGA--ACA 8187114 Query 63 TTA--CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||| ||||||||||| |||||||| | ||||||||||| || || || | ||| Sbjct 8187113 TTAGTGCATGGAATAATGGAATAGGATCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTCG 8187056 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||| || |||||| | ||| | || | ||||||||||| Sbjct 8187055 AGGTAATGATTAATAGGGACAGACGGGGGCATTCGTACTGCGACGTTAGAGGTGAAATTC 8186996 Query 181 TTGGAT 186 |||||| Sbjct 8186995 TTGGAT 8186990 >seq1 Length=28534321 Score = 104 bits (114), Expect = 2e-20 Identities = 139/186 (75%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CT-TTGCTCGAATACA 62 |||| || ||||||||||||||||| ||| | ||||||||||| || || || ||| Sbjct 8290145 CCAGCACGTTTACTTTGAAAAAATTGGAGTGCTCAAAGCAGGCGCTACAGCCTGA--ACA 8290088 Query 63 TTA--CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||| ||||||||||| |||||||| | ||||||||||| || || || | ||| Sbjct 8290087 TTAGTGCATGGAATAATGGAATAGGATCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTCG 8290030 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||| || |||||| | ||| | || | ||||||||||| Sbjct 8290029 AGGTAATGATTAATAGGGACAGACGGGGGCATTCGTACTGCGACGTTAGAGGTGAAATTC 8289970 Query 181 TTGGAT 186 |||||| Sbjct 8289969 TTGGAT 8289964 Score = 89.7 bits (98), Expect = 5e-16 Identities = 138/186 (74%), Gaps = 11/186 (6%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CT-TTGCTCGAATACA 62 |||| || ||||||||||||||| | ||| | ||||||||||| || || || ||| Sbjct 8288818 CCAGCACGTTTACTTTGAAAAAA-TGGAGTGCTCAAAGCAGGCGCTACAGCCTGA--ACA 8288874 Query 63 TTA--CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||| ||||||||||| |||||||| | ||||||||||| || || || | ||| Sbjct 8288875 TTAGTGCATGGAATAATGGAATAGGATCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTCG 8288932 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||| || ||||| || ||| | || | ||||||||||| Sbjct 8288933 AGGTAATGATTAATA-GGACAGACGGGGCATTC-GTACTGCGACGTTAGAGGTGAAATTC 8288990 Query 181 TTGGAT 186 |||||| Sbjct 8288991 TTGGAT 8288996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999196480