Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2 489 5e-136 seq1 489 5e-136 seq20 464 2e-128 >seq2 Length=19542282 Score = 489 bits (542), Expect = 5e-136 Identities = 421/513 (82%), Gaps = 11/513 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| || | || ||||| | ||||| ||||| | ||||||||| Sbjct 8174311 GTACTCATTCCGATTACGGAGCCTCATAAGAGTTCCGTATCGTTATTTTTCGTCACTACC 8174370 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8174371 TCCCCGAGCTGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 8174430 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 8174431 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACCACCATGGT 8174490 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||| |||||||| |||||| | ||||| || | ||||||| Sbjct 8174491 AGGCGCATAACCTACCATCGACAGTTGATAAGGCAGACACTTGAAAGATACGTCGCCGGT 8174550 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG----AGCCCCGAAGG-GC 294 | || || |||||| | |||||||| || ||||||| | | |||||||| | Sbjct 8174551 ACGAGACCGTGCGATCAGCAAAGTTATTCAGAGTCACCAATGTAACGGACCCGAAGGCCC 8174610 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTC--CGA-AGTCGGGGTTTTTAGCATGTAT 351 | | | ||| |||||||||| | | ||||| ||| || || | | |||||||| Sbjct 8174611 GATTGGCTTTGATCTAATAAAAGCGCTCCTTCCACGAGGGTTGGAGCTCAGCGCATGTAT 8174670 Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTG 411 |||||||||||||||||| |||||||| ||||||| || | ||| || ||| ||||||| Sbjct 8174671 TAGCTCTAGAATTACCACAGTTATCCAAGTAGTAA-GTGCGATCTAAGGAACCATAACTG 8174729 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 || ||||||||||||||| |||||||| ||| | |||| |||||||||||||||||| Sbjct 8174730 ATGTAATGAGCCATTCGCGGTTTCACTTTAT-TTTCGCTTGAACTTAGACATGCATGGCT 8174788 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||| Sbjct 8174789 TAATCTTTGAGACAAGCATATGACTACTGGCAG 8174821 Score = 489 bits (542), Expect = 5e-136 Identities = 421/513 (82%), Gaps = 11/513 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| || | || ||||| | ||||| ||||| | ||||||||| Sbjct 8187389 GTACTCATTCCGATTACGGAGCCTCATAAGAGTTCCGTATCGTTATTTTTCGTCACTACC 8187448 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8187449 TCCCCGAGCTGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 8187508 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 8187509 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACCACCATGGT 8187568 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||| |||||||| |||||| | ||||| || | ||||||| Sbjct 8187569 AGGCGCATAACCTACCATCGACAGTTGATAAGGCAGACACTTGAAAGATACGTCGCCGGT 8187628 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG----AGCCCCGAAGG-GC 294 | || || |||||| | |||||||| || ||||||| | | |||||||| | Sbjct 8187629 ACGAGACCGTGCGATCAGCAAAGTTATTCAGAGTCACCAATGTAACGGACCCGAAGGCCC 8187688 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTC--CGA-AGTCGGGGTTTTTAGCATGTAT 351 | | | ||| |||||||||| | | ||||| ||| || || | | |||||||| Sbjct 8187689 GATTGGCTTTGATCTAATAAAAGCGCTCCTTCCACGAGGGTTGGAGCTCAGCGCATGTAT 8187748 Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTG 411 |||||||||||||||||| |||||||| ||||||| || | ||| || ||| ||||||| Sbjct 8187749 TAGCTCTAGAATTACCACAGTTATCCAAGTAGTAA-GTGCGATCTAAGGAACCATAACTG 8187807 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 || ||||||||||||||| |||||||| ||| | |||| |||||||||||||||||| Sbjct 8187808 ATGTAATGAGCCATTCGCGGTTTCACTTTAT-TTTCGCTTGAACTTAGACATGCATGGCT 8187866 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||| Sbjct 8187867 TAATCTTTGAGACAAGCATATGACTACTGGCAG 8187899 >seq1 Length=28534321 Score = 489 bits (542), Expect = 5e-136 Identities = 421/513 (82%), Gaps = 11/513 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| || | || ||||| | ||||| ||||| | ||||||||| Sbjct 8288602 GTACTCATTCCGATTACGGAGCCTCATAAGAGTTCCGTATCGTTATTTTTCGTCACTACC 8288543 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8288542 TCCCCGAGCTGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 8288483 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 8288482 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACCACCATGGT 8288423 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||| |||||||| |||||| | ||||| || | ||||||| Sbjct 8288422 AGGCGCATAACCTACCATCGACAGTTGATAAGGCAGACACTTGAAAGATACGTCGCCGGT 8288363 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG----AGCCCCGAAGG-GC 294 | || || |||||| | |||||||| || ||||||| | | |||||||| | Sbjct 8288362 ACGAGACCGTGCGATCAGCAAAGTTATTCAGAGTCACCAATGTAACGGACCCGAAGGCCC 8288303 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTC--CGA-AGTCGGGGTTTTTAGCATGTAT 351 | | | ||| |||||||||| | | ||||| ||| || || | | |||||||| Sbjct 8288302 GATTGGCTTTGATCTAATAAAAGCGCTCCTTCCACGAGGGTTGGAGCTCAGCGCATGTAT 8288243 Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTG 411 |||||||||||||||||| |||||||| ||||||| || | ||| || ||| ||||||| Sbjct 8288242 TAGCTCTAGAATTACCACAGTTATCCAAGTAGTAA-GTGCGATCTAAGGAACCATAACTG 8288184 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 || ||||||||||||||| |||||||| ||| | |||| |||||||||||||||||| Sbjct 8288183 ATGTAATGAGCCATTCGCGGTTTCACTTTAT-TTTCGCTTGAACTTAGACATGCATGGCT 8288125 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||| Sbjct 8288124 TAATCTTTGAGACAAGCATATGACTACTGGCAG 8288092 Score = 489 bits (542), Expect = 5e-136 Identities = 421/513 (82%), Gaps = 11/513 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| || | || ||||| | ||||| ||||| | ||||||||| Sbjct 8290363 GTACTCATTCCGATTACGGAGCCTCATAAGAGTTCCGTATCGTTATTTTTCGTCACTACC 8290422 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8290423 TCCCCGAGCTGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 8290482 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 8290483 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACCACCATGGT 8290542 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||| |||||||| |||||| | ||||| || | ||||||| Sbjct 8290543 AGGCGCATAACCTACCATCGACAGTTGATAAGGCAGACACTTGAAAGATACGTCGCCGGT 8290602 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG----AGCCCCGAAGG-GC 294 | || || |||||| | |||||||| || ||||||| | | |||||||| | Sbjct 8290603 ACGAGACCGTGCGATCAGCAAAGTTATTCAGAGTCACCAATGTAACGGACCCGAAGGCCC 8290662 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTC--CGA-AGTCGGGGTTTTTAGCATGTAT 351 | | | ||| |||||||||| | | ||||| ||| || || | | |||||||| Sbjct 8290663 GATTGGCTTTGATCTAATAAAAGCGCTCCTTCCACGAGGGTTGGAGCTCAGCGCATGTAT 8290722 Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTG 411 |||||||||||||||||| |||||||| ||||||| || | ||| || ||| ||||||| Sbjct 8290723 TAGCTCTAGAATTACCACAGTTATCCAAGTAGTAA-GTGCGATCTAAGGAACCATAACTG 8290781 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 || ||||||||||||||| |||||||| ||| | |||| |||||||||||||||||| Sbjct 8290782 ATGTAATGAGCCATTCGCGGTTTCACTTTAT-TTTCGCTTGAACTTAGACATGCATGGCT 8290840 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||| Sbjct 8290841 TAATCTTTGAGACAAGCATATGACTACTGGCAG 8290873 >seq20 Length=3361948 Score = 464 bits (514), Expect = 2e-128 Identities = 389/470 (83%), Gaps = 10/470 (2%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||||||| | |||| |||||||||||||||||||||||||||| Sbjct 1109595 TATTTTTCGTCACTACCTCCCCGAGCTGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCC 1109536 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1109535 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTA 1109476 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 |||||| |||||||||||| || ||||||||||| |||||||| |||||| | ||| Sbjct 1109475 CCCGTTACCACCATGGTAGGCGCATAACCTACCATCGACAGTTGATAAGGCAGACACTTG 1109416 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG- 281 || || | ||||||| | || || |||||| | |||||||| || ||||||| | Sbjct 1109415 AAAGATACGTCGCCGGTACGAGACCGTGCGATCAGCAAAGTTATTCAGAGTCACCAATGT 1109356 Query 282 ---AGCCCCGAAGG-GCGTTGGTTTTTTATCTAATAAATACACCCCTTC--CGA-AGTCG 334 | |||||||| || | | ||| |||||||||| | | ||||| ||| || | Sbjct 1109355 AACGGACCCGAAGGCCCGATTGGCTTTGATCTAATAAAAGCGCTCCTTCCACGAGGGTTG 1109296 Query 335 GGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT 394 | | | |||||||||||||||||||||||||| |||||||| ||||||| || | || Sbjct 1109295 GAGCTCAGCGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGTAA-GTGCGAT 1109237 Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 | || ||| ||||||||| ||||||||||||||| |||||||| ||| | |||| | Sbjct 1109236 CTAAGGAACCATAACTGATGTAATGAGCCATTCGCGGTTTCACTTTAT-TTTCGCTTGAA 1109178 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1109177 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1109128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397553152