Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23]
1,042 sequences; 153,631,861 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq217 334 1e-89
>seq217
Length=121070
Score = 334 bits (370), Expect = 1e-89
Identities = 246/283 (87%), Gaps = 5/283 (2%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| || | ||||| ||||||||||||||||||||||||||||||
Sbjct 59623 TACTGAGCAGGATTACTATCGCAACGACGAGTCATCAGTAGGGTAAAACTAACCTGTCTC 59682
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||| || | ||||||||||||| |||||| ||
Sbjct 59683 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCG 59742
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 59743 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 59802
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||
Sbjct 59803 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACTTCTTGCT 59862
Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280
||| ||| | | | | |||||||||||||| |||||
Sbjct 59863 GAAAACTCTTCAA--GCCAAGAGGATCGATAGGCCGTGCTTTC 59903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854391097152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |