Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq217 176 1e-41 seq179 174 5e-41 seq303 172 2e-40 >seq217 Length=121070 Score = 176 bits (194), Expect = 1e-41 Identities = 163/206 (79%), Gaps = 7/206 (3%) Strand=Plus/Plus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233 ||||| | | || |||||||| || |||| | |||||||||||||| ||| | | Sbjct 60183 TCCGCCTAACCGAGTAAGTAAAGAACCGATGAAAGTAGTGGTATTTCAACGGCGATGTTA 60242 Query 234 CGG-CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | ||||||||||| |||||||||||| ||| | ||| | | |||||||||||||| Sbjct 60243 CCATCTCCCACTTATGCTACACCTCTCATGTCTCCTTACAGTGCCAGACTAGAGTCAAGC 60302 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC------GTTCCCTTGGCTGTG 346 ||||||| |||||||||||||||| ||| |||||||| ||||||||||| ||| Sbjct 60303 TCAACAGCGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCTTGGAAGTTCCCTTGGCAGTG 60362 Query 347 GTTTCGCTAGATAGTAGATAGGGACA 372 ||||||||||| |||||||||||||| Sbjct 60363 GTTTCGCTAGAAAGTAGATAGGGACA 60388 Score = 158 bits (174), Expect = 4e-36 Identities = 93/97 (96%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 ||||||||||||||||||||||||||||||||| | ||| |||||||||||||| ||||| Sbjct 71978 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGTGTTTGCTTGAATTTCTTCACGTTGAC 72037 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||| Sbjct 72038 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 72074 Score = 136 bits (150), Expect = 1e-29 Identities = 75/75 (100%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 65576 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 65635 Query 419 GAGGCATTTGGCTAC 433 ||||||||||||||| Sbjct 65636 GAGGCATTTGGCTAC 65650 Score = 118 bits (130), Expect = 3e-24 Identities = 98/120 (82%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 59950 CTTTTGCTCTACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 60009 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||| || |||| || | |||||| Sbjct 60010 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAATCGGATC 60069 >seq179 Length=161816 Score = 174 bits (192), Expect = 5e-41 Identities = 101/104 (97%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 14285 CTTCCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCA 14226 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | |||||||||||||||||||||||||||||||||||||||||| Sbjct 14225 CGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 14182 Score = 163 bits (180), Expect = 9e-38 Identities = 93/95 (98%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 95 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTG 36 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 529 ||||||||||||||||||||||||||||||||||| Sbjct 35 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 1 Score = 134 bits (148), Expect = 5e-29 Identities = 74/74 (100%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15563 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 15504 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 15503 GAGGCATTTGGCTA 15490 Score = 118 bits (130), Expect = 3e-24 Identities = 67/68 (99%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6363 TAGGGACAGTAGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 6304 Query 425 TTTGGCTA 432 |||||||| Sbjct 6303 TTTGGCTA 6296 >seq303 Length=60023 Score = 172 bits (190), Expect = 2e-40 Identities = 98/100 (98%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 9597 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTT 9538 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||| Sbjct 9537 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 9498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635182961216