Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23]
1,042 sequences; 153,631,861 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq217 176 1e-41
seq179 174 5e-41
seq303 172 2e-40
>seq217
Length=121070
Score = 176 bits (194), Expect = 1e-41
Identities = 163/206 (79%), Gaps = 7/206 (3%)
Strand=Plus/Plus
Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233
||||| | | || |||||||| || |||| | |||||||||||||| ||| | |
Sbjct 60183 TCCGCCTAACCGAGTAAGTAAAGAACCGATGAAAGTAGTGGTATTTCAACGGCGATGTTA 60242
Query 234 CGG-CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292
| ||||||||||| |||||||||||| ||| | ||| | | ||||||||||||||
Sbjct 60243 CCATCTCCCACTTATGCTACACCTCTCATGTCTCCTTACAGTGCCAGACTAGAGTCAAGC 60302
Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC------GTTCCCTTGGCTGTG 346
||||||| |||||||||||||||| ||| |||||||| ||||||||||| |||
Sbjct 60303 TCAACAGCGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCTTGGAAGTTCCCTTGGCAGTG 60362
Query 347 GTTTCGCTAGATAGTAGATAGGGACA 372
||||||||||| ||||||||||||||
Sbjct 60363 GTTTCGCTAGAAAGTAGATAGGGACA 60388
Score = 158 bits (174), Expect = 4e-36
Identities = 93/97 (96%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496
||||||||||||||||||||||||||||||||| | ||| |||||||||||||| |||||
Sbjct 71978 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGTGTTTGCTTGAATTTCTTCACGTTGAC 72037
Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||||||||
Sbjct 72038 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 72074
Score = 136 bits (150), Expect = 1e-29
Identities = 75/75 (100%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 65576 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 65635
Query 419 GAGGCATTTGGCTAC 433
|||||||||||||||
Sbjct 65636 GAGGCATTTGGCTAC 65650
Score = 118 bits (130), Expect = 3e-24
Identities = 98/120 (82%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| ||| ||||||| ||| |||| ||||||||||||||||||||
Sbjct 59950 CTTTTGCTCTACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 60009
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||||||| ||||||||| |||||||||| |||| || |||| || | ||||||
Sbjct 60010 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAATCGGATC 60069
>seq179
Length=161816
Score = 174 bits (192), Expect = 5e-41
Identities = 101/104 (97%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 14285 CTTCCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCA 14226
Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 14225 CGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 14182
Score = 163 bits (180), Expect = 9e-38
Identities = 93/95 (98%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 95 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTG 36
Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 529
|||||||||||||||||||||||||||||||||||
Sbjct 35 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 1
Score = 134 bits (148), Expect = 5e-29
Identities = 74/74 (100%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 15563 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 15504
Query 419 GAGGCATTTGGCTA 432
||||||||||||||
Sbjct 15503 GAGGCATTTGGCTA 15490
Score = 118 bits (130), Expect = 3e-24
Identities = 67/68 (99%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6363 TAGGGACAGTAGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 6304
Query 425 TTTGGCTA 432
||||||||
Sbjct 6303 TTTGGCTA 6296
>seq303
Length=60023
Score = 172 bits (190), Expect = 2e-40
Identities = 98/100 (98%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 9597 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTT 9538
Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||
Sbjct 9537 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 9498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635182961216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |