Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq113 279 4e-70 seq109 277 1e-69 seq47 95.1 1e-14 >seq113 Length=346302 Score = 279 bits (308), Expect = 4e-70 Identities = 1124/1742 (65%), Gaps = 54/1742 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||| || || ||||| | || | || || || || |||||||| || ||| Sbjct 256284 TCAACGGTGAATTGAATGGCATTGGTGGCTGGTTTTGTTCTGAGGTAGTACATTCCAGTC 256343 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || ||||||| ||| | |||||||||| |||| | || | | | || | Sbjct 256344 TTCAGGCCAGACTCCCATCCGAAGAAATGCATGGATGTGAGCTTCTCGGGAGTTGGATTT 256403 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 |||| ||| | ||| ||||| ||| |||||| | |||||||| |||||||| Sbjct 256404 GCCATATGAACATTGGTGGACTGGGACTGGTCGATGAAGGCCCCACGATCAGCAGCCATC 256463 Query 65258 TCAATGATACGACGTCCCGATA-TCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315 | | ||| | | || | | | |||||||| || ||||||| | | | | || Sbjct 256464 TTGAGGAT-CATCCTCTGGGGAATTTCCCAGACTGTTCTGTACAGT-GCCTTGAGGTCTG 256521 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 ||| || | || |||| ||||| || ||| | || || || | || ||| Sbjct 256522 CTGGGATGTTGTCGATGTTCTGGATCGAGCCATTGCTCGCTATTATCTGGTTCTTCATGT 256581 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || ||| | | | ||| | || | | | || || |||||| ||||||| Sbjct 256582 CGTCGTCCCAGAGATCACGCTCGGTGAGGTCCTTCAGCAGATGGGGATTGACTACTTGGA 256641 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 | || || ||||||||||| | | ||||||||| ||| || |||| || || Sbjct 256642 ATTCACCAGACAGTACACGCCTCGCGTAGATGTTGCTGGTGTAAGGCTCAATGGCCTCGT 256701 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 |||| || ||||||||||| || || || |||||||| || || | | | ||||| | Sbjct 256702 TGTTACCCAGAATTTGGGCTGTTGAGGCTGTTGGCATTGGTGCCAGTAGGAGAGAGTTCC 256761 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGC--AATTCGTCCCAGTTCCACATCGGTTTATC 65613 | |||| ||| || || | | | ||| |||||| ||| | | ||| | Sbjct 256762 TAATACCGTG--TTTAGATATTTTATCCTTGAGTTCAGCCCAGTCCCAGA--GATTTGTT 256817 Query 65614 GTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAG 65673 | | | ||| |||||| || | || ||| | || ||| | ||||| || Sbjct 256818 GGTGTTA--CACC--CCACATGTCATACTGGAGGATGCCCTGGCTGACTGGTGAGCCTTT 256873 Query 65674 GAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAA 65733 | | | ||||| |||| ||||| ||| || | || || |||||| || || | Sbjct 256874 GTACGTCTCGTAGGTGCCCTTCTCCTGGGCGAGCTCGCATGAGGCCTCGAGGGCACCATA 256933 Query 65734 ATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCAT 65793 ||| | ||||||||| || | ||| |||| | ||||||| ||| ||| | || Sbjct 256934 ATACAGGGTCTCGAAGATCTGGATATTGAGTTTCTGGGCCTCATTGCTGTCGAATGGATA 256993 Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853 || |||||| | ||| | || |||||||| ||||||||||| || ||||||||||| | Sbjct 256994 ACGCATCAGTAGAAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGGACGATGTCT 257053 Query 65854 CAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAA 65913 || ||||| ||| ||||| | ||||| ||||||| |||||||| | | | Sbjct 257054 CATGTTGGAGACTCTTGCCTCCTCGATTGGGTAATAATTGACATCGATAACTCTGTCGAG 257113 Query 65914 ATTGCGTGTCACCACATGCACGATACGTC-GCA-ATTGTTCGAAATCAAAATGTTTAGGA 65971 ||| | || || | | |||| ||| || ||||| | | || | ||| | Sbjct 257114 ATTTCTTGCGACGATTTTGACGA-CTGTCTTCAGCTTGTTAAAGTTGTAAGTCTTTTTCA 257172 Query 65972 CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACA 66031 | | || |||| ||| || | |||| || || | ||||| ||| Sbjct 257173 C--TGGG-----------TCCACGAACATGTTGACTGCAATCGAGGCCAAATTGCAAACA 257219 Query 66032 GCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATG 66091 || | || || || | |||||||| || || || |||| || ||||| ||| Sbjct 257220 GCAACTTCATCGGGGCTCGAGTACTCGACGATCTCAGTACACAAGTTGCTGCATTTTATC 257279 Query 66092 GTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGA 66151 || ||||| |||| ||||| || | ||||||||| |||||||||| |||||| ||| Sbjct 257280 GTTCCCAAGTTCTTCTGATTGGATTTTCTATTGCATGCGTCCTTGTACAGCATGTAGGGA 257339 Query 66152 GTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTA 66211 || || ||||| ||||| ||| || || || ||| || | || || |||||| | Sbjct 257340 GTTCCAGTCTCGACTTGTGACATAAGAATTGCAGTCCAGAGCTCACGAGCTTTCACCTGA 257399 Query 66212 CG-----TACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCAC 66266 || || | ||| || | ||||| ||| |||||| | ||||| |||| Sbjct 257400 CGCTTGAAACGGGCCT--CT---CCCTCGTACTGTGTGTAGAGCTTCTCGAATTCCTCAC 257454 Query 66267 CCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCT 66326 |||| || | || | |||||| | ||| || |||||||| ||| || | ||| Sbjct 257455 CCCAGGTGTCACATAGGCCTGGACATTCGTGGGGGCACATCAGACTCCACACATCGTCCG 257514 Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386 ||||| ||| |||| ||| || |||||||| ||||| || || || ||||||| Sbjct 257515 CCAGAACACGTTTCATGAATAAATCCGGGATCCAGAGTGCGTAAAAAAGTTCACGTGCTC 257574 Query 66387 GTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGC 66445 | | ||||| | || ||| ||||| | ||||| | || || ||||| || ||| Sbjct 257575 GATATTCCTCTTTTCCTGTG-TTTTTCTTGAGATCGAGAACATCGAATATGTCAGCGTGC 257633 Query 66446 CATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAG 66505 || || || || || ||||| || | || ||||||| ||||| || || || || Sbjct 257634 CAGGGCTCGAGATAAATGGCAAATGCTCCAGGACGTTTGTTTCCACCCTGATCAACATAA 257693 Query 66506 CGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTG 66565 || || || ||| | ||||| | ||| ||||| ||||| || ||| | |||||||| Sbjct 257694 CGTGCTGTGTTATTGTAAACACGAAGCATGGGTACAAGCCCATTGGATATACCATTGGTA 257753 Query 66566 CCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624 || | || | | ||| | | || | ||| ||| ||||||| ||||| ||||| || Sbjct 257754 CCAGCAATTCGTG-TCCCCTTGGCTCTGATACAGTGTACATTCACTCCAATTCCACCAGC 257812 Query 66625 CGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCA 66682 | || |||| ||||| || | |||| | | ||||| | |||| ||| Sbjct 257813 TGATTTGCTGATGAGTGCACACCTCTTGAGGGTGTC--GTAGATGCCATTAATGCTGTCG 257870 Query 66683 CCCTTGATGGTCAGGAGGTAGCA--TGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGA 66740 | | || |||||||| | || || || | || || | ||| ||| |||| Sbjct 257871 TCAGTCATTGTCAGGAGAAAACAGCTGGAC--ATCTGTTGTCTACCAGTGCAGGCTGAGA 257928 Query 66741 AGAGGGTGGGTGTAGCGTGCGTAAAGTA-ATGGCGAGACATGTAATTGTACGTCTCGATG 66799 | ||||| |||| ||||| || ||||| | || |||| || ||||| ||||| ||| Sbjct 257929 AAAGGGTTGGTGATGCGTGAGTGAAGTATCTCTCG-GACAGATAGTTGTATGTCTCAATG 257987 Query 66800 AC 66801 || Sbjct 257988 AC 257989 >seq109 Length=386716 Score = 277 bits (306), Expect = 1e-69 Identities = 1009/1561 (65%), Gaps = 34/1561 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||| ||||| ||||| | || | |||||||| || |||||||| || ||| Sbjct 266537 TCGACAGTGAATTGGATGGCATTGGTGGCTGGTTTGGTCCTGAGGTAGTACATTCCAGTC 266478 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | |||||| |||| | |||||||||| || | | |||| || | || | Sbjct 266477 TTCAAGCCAGCCTCCCAACCGAAGAAATGCATGGAGGTGAGTTTTTCAGTTGTTGGATTT 266418 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 || | || | ||| | ||||| |||||||||| | |||||||| || ||||| Sbjct 266417 GCTATGTGAACATTGAGAGACTGGGACTGATCGATGAAGGCCCCACGATCAGCTGCCATC 266358 Query 65258 TCAATGATACGACGTCCCGATA-TCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315 | | ||| | | || | | |||||||||| || ||||||| | | | | || Sbjct 266357 TTGAGGAT-CATCCTCTGGGGAATCTCCCAGACTGTTCTGTACAGT-GCCTTGATGTCTG 266300 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 ||| || || |||| ||||| || ||| || || || | || | |||| Sbjct 266299 CTGGGATGCTGTCGATGTTCTGGATCGAGCCATTGTTCGCTATTATCAGGTTCCTCATCT 266240 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || ||| | ||| | || | | | | || |||||| || |||| Sbjct 266239 CGTCGTCCCAGAGGTTGCGCTCGGTGAGGTCCTTCAGGAGATGGGGATTGACCACCTGGA 266180 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 | || || |||| |||||| | ||||| ||| ||| ||| || | || || Sbjct 266179 ATTCACCAGACAATACACGTCTCGAGTAGATATTGCTGGTGTAGGGCTCGATGGCCTCGT 266120 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 |||| || ||||||||||| || || || |||||||| || || | | | ||||| | Sbjct 266119 TGTTCCCAAGAATTTGGGCTGTTGAGGCTGTTGGCATTGGTGCCAGTAGGAGAGAGTTCC 266060 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGT 65615 | |||| | ||| || | | || |||||| ||| | | ||| | | Sbjct 266059 TGATACCGTGTTTGGAAATTTTATCCTTGAGTTTAGCCCAGTCCCAGA--GATTTGTTGG 266002 Query 65616 CGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGA 65675 | | ||| |||||| || | || ||| | || ||| | ||||| || | Sbjct 266001 TGTTA--CACC--CCACATGTCGTACTGGAGGATGCCCTGGCTGACTGGTGAGCCTTTGT 265946 Query 65676 AACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAAT 65735 | | ||||| |||| ||||| ||| || | || || ||||||||| | ||| Sbjct 265945 ACGTCTCGTAGGTGCCCTTCTCCTGGGCGAGCTCGCATGAGGCCTCGAGTGCACCGTAAT 265886 Query 65736 AAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATAC 65795 | | ||||||||| || | ||| |||| | || |||||||| ||| | || || Sbjct 265885 ACAGGGTCTCGAAGATCTGGATATTGAGTTTCTGGGCGTCATCGCTGTCGAATGGATAAC 265826 Query 65796 CCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCA 65855 |||||| | ||| | || |||||||| ||||||||||| || |||||||| || | || Sbjct 265825 GCATCAGTAGAAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGGACGGTGTCTCA 265766 Query 65856 AATTGGAACGTCTCGCCT---CAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCA 65912 ||||| | | |||| || || ||||| | ||||| ||||| | | | | Sbjct 265765 CGTTGGAGACTTTTGCCTGCTCAAGT---GGGTAATGATTGACGTCGATCACTCTGTCGA 265709 Query 65913 AATTGCGTGTCACCACATGCACGATACGTCG-CAATTGTTCGAAATCAAAATGTTTAGGA 65971 || | || || || | |||| ||| || | | || || || ||| Sbjct 265708 GGTTTCTGGTAACAACTTTGACGACT-GTCTTCAGCTTCTTAAAGTCGTAAGTTTTTT-- 265652 Query 65972 CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACA 66031 || | ||| |||| ||| || || |||| || || | ||||| ||| Sbjct 265651 ---TCA------CTGGAT-CCACGAACATGTTAACTGCAATCGAGGCCAAATTGCAAACA 265602 Query 66032 GCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATG 66091 || || || || || | ||||| || || || ||||||| || ||||| ||| Sbjct 265601 GCAATTTCATCGGGGCTCGAGTACTCCACGATCTCAGTGCACAAGTTGCTGCATTTTATC 265542 Query 66092 GTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGA 66151 || ||||| |||| ||||| || || |||||||| || ||||||| |||||| || Sbjct 265541 GTTCCCAAGTTCTTCTGATTGGATTTCCGGTTGCATGCGTCTTTGTACAGCATGTAGGGG 265482 Query 66152 GTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTA 66211 || || ||||| ||||| ||| || || || ||| ||| | || ||||||||| | Sbjct 265481 GTCCCAGTCTCGACTTGTGACATAAGAATTGCAGTCCAGAGATCACGAGCCTTCACCTGA 265422 Query 66212 CGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCAT 66271 || | | | | | ||||| | | ||||||| | || || ||||||||| Sbjct 265421 CGCTTGAAACGAGCCTCGTTCTCGTATTTTACGTAGAGATTCTCAAACTCTTCACCCCAA 265362 Query 66272 ACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCT 66331 || | || | |||||||| ||| || |||||||| ||| ||||||| Sbjct 265361 GAGTCACAAAGGCCTGGACACTCGTGGGGGCACATCAGACTCCACATACCATCCGCCAGG 265302 Query 66332 ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGC 66391 || || ||| ||||||||||| |||||||| |||||||| || || || |||| | Sbjct 265301 ACTCGTTTCATGAATAGATCAGGAATCCAGAGTGCGTAGAACAGCTCACGCGCTCTATAT 265242 Query 66392 TCCTCAATGCCGTGATTTTTGCGCAAG-TCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450 ||||| | || || || | | || ||||| | ||||||||||| || ||||| || Sbjct 265241 TCCTCCTTTCC-TGTGTTCTTCTTGAGATCGAGAACATCAAAGATGTCAGCGTGCCAGGG 265183 Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 || || || ||||| || | ||| ||||||| ||||| || || ||||| || || Sbjct 265182 CTCGAGATAAATGGCAAATGCGCCAGGACGTTTGTTTCCACCCTGATCAACGTAACGTGC 265123 Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570 || ||| | ||||| | ||| ||||| ||||| || ||| |||||||| || | Sbjct 265122 TGTGTTATTGTAAACACGAAGCATGGGTACAAGCCCATTGGATACACCATTGGTACCAGC 265063 Query 66571 GATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCT 66629 || | | ||| | | || | ||| ||||||||||| ||||||||||| || | || Sbjct 265062 AATTCGTG-TCCCCTTGGCTCTGATACAGTGAACATTCACTCCAATACCACCAGCTGACT 265004 Query 66630 T 66630 | Sbjct 265003 T 265003 >seq47 Length=978588 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 61192 CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT 61251 || |||||| || || | ||||| || || || || || || || || ||||||||| Sbjct 561050 CACTTCATTTCCCACGTTCTAGCGTTTTTCGCTGCATCAGATGGAATTGTGAATGAGAAT 561109 Query 61252 TTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTC 61311 || ||||||| ||| || || || ||||| | || || | ||||||||||| || Sbjct 561110 CTAGTGGAACGATTCAGTCAAGAAGTCCAAGTCACTGAAGCAAGATGTTTCTACGGGTTT 561169 Query 61312 CAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATC 61371 || |||| ||||| ||| | || ||||||||||| || | ||||| || |||||| Sbjct 561170 CAAGTTGCAATGGAAAATATACATTCGGAGATGTATTCACTTTTAATCGAAACTTACATC 561229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397562951134880