Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq122 185 2e-44
>seq122
Length=4874392
Score = 185 bits (204), Expect = 2e-44
Identities = 236/324 (73%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||| ||| |||||| ||| | | ||||||| || ||||| | |
Sbjct 4452918 AGGGGAGTGAAACAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACCTTCGTGGT 4452977
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
||||| |||| ||||||| |||||| | | ||| ||| | || ||| |||||||
Sbjct 4452978 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATTCTGTAGCAAGGTTAACC 4453036
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190
| | || ||||| || |||| |||| |||||| ||||| ||||| ||
Sbjct 4453037 GTATAGGGG-----AGCCGCAGGGAAACCGAGTCTTAACTGGGCGTTAAGTTGCAGGGTA 4453091
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
||||| ||||||| |||||||| ||| | ||||||||||| |||||| | |||
Sbjct 4453092 TAGACCCGAAACCCGGTGATCTAGCCATGGGCAGGTTGAAGGTTGGGTAACACTAACTGG 4453151
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
|||||||||||| || |||||||| || ||||||||| | || | ||||||||||||
Sbjct 4453152 AGGACCGAACCGACTAATGTTGAAAAATTAGCGGATGACTTGTGGCTGGGGGTGAAAGGC 4453211
Query 311 CAATCAAACTGGGAAATAGCTCGT 334
||||||||| |||| |||||| ||
Sbjct 4453212 CAATCAAACCGGGAGATAGCTGGT 4453235
Score = 185 bits (204), Expect = 2e-44
Identities = 236/324 (73%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||| ||| |||||| ||| | | ||||||| || ||||| | |
Sbjct 4584531 AGGGGAGTGAAACAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACCTTCGTGGT 4584590
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
||||| |||| ||||||| |||||| | | ||| ||| | || ||| |||||||
Sbjct 4584591 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATTCTGTAGCAAGGTTAACC 4584649
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190
| | || ||||| || |||| |||| |||||| ||||| ||||| ||
Sbjct 4584650 GTATAGGGG-----AGCCGCAGGGAAACCGAGTCTTAACTGGGCGTTAAGTTGCAGGGTA 4584704
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
||||| ||||||| |||||||| ||| | ||||||||||| |||||| | |||
Sbjct 4584705 TAGACCCGAAACCCGGTGATCTAGCCATGGGCAGGTTGAAGGTTGGGTAACACTAACTGG 4584764
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
|||||||||||| || |||||||| || ||||||||| | || | ||||||||||||
Sbjct 4584765 AGGACCGAACCGACTAATGTTGAAAAATTAGCGGATGACTTGTGGCTGGGGGTGAAAGGC 4584824
Query 311 CAATCAAACTGGGAAATAGCTCGT 334
||||||||| |||| |||||| ||
Sbjct 4584825 CAATCAAACCGGGAGATAGCTGGT 4584848
Score = 185 bits (204), Expect = 2e-44
Identities = 236/324 (73%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||| ||| |||||| ||| | | ||||||| || ||||| | |
Sbjct 4740036 AGGGGAGTGAAACAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACCTTCGTGGT 4740095
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
||||| |||| ||||||| |||||| | | ||| ||| | || ||| |||||||
Sbjct 4740096 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATTCTGTAGCAAGGTTAACC 4740154
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190
| | || ||||| || |||| |||| |||||| ||||| ||||| ||
Sbjct 4740155 GTATAGGGG-----AGCCGCAGGGAAACCGAGTCTTAACTGGGCGTTAAGTTGCAGGGTA 4740209
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
||||| ||||||| |||||||| ||| | ||||||||||| |||||| | |||
Sbjct 4740210 TAGACCCGAAACCCGGTGATCTAGCCATGGGCAGGTTGAAGGTTGGGTAACACTAACTGG 4740269
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
|||||||||||| || |||||||| || ||||||||| | || | ||||||||||||
Sbjct 4740270 AGGACCGAACCGACTAATGTTGAAAAATTAGCGGATGACTTGTGGCTGGGGGTGAAAGGC 4740329
Query 311 CAATCAAACTGGGAAATAGCTCGT 334
||||||||| |||| |||||| ||
Sbjct 4740330 CAATCAAACCGGGAGATAGCTGGT 4740353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972739073536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |