Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq122 219 3e-55 >seq122 Length=4874392 Score = 219 bits (242), Expect = 3e-55 Identities = 123/124 (99%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 4452034 CCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 4451975 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4451974 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 4451915 Query 135 TGTA 138 |||| Sbjct 4451914 TGTA 4451911 Score = 219 bits (242), Expect = 3e-55 Identities = 123/124 (99%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 4583648 CCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 4583589 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4583588 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 4583529 Query 135 TGTA 138 |||| Sbjct 4583528 TGTA 4583525 Score = 219 bits (242), Expect = 3e-55 Identities = 123/124 (99%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 4739152 CCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 4739093 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4739092 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 4739033 Query 135 TGTA 138 |||| Sbjct 4739032 TGTA 4739029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345579707880