Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01000345.1
Length=193
Score E
Sequences producing significant alignments: (Bits) Value
seq122 104 2e-20
>seq122
Length=4874392
Score = 104 bits (114), Expect = 2e-20
Identities = 136/187 (73%), Gaps = 5/187 (3%)
Strand=Plus/Minus
Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60
|||||||| ||||||| ||||||| |||||||| ||||| ||||| || | |
Sbjct 4585631 TTACCTGATGCTTAGAGGCTTTTCCTGGAAGCAGGGCATTTGTTACTTCAGCACCGTAGT 4585572
Query 61 GATAACTCGTCATCAGCTCCCGGCCTTA--GAATCCCGGATTTACCTAAGATTCCAGCCT 118
| |||||||||| | | |||||| || | |||||||| ||| | || |||||
Sbjct 4585571 GC---CTCGTCATCACGCCTCAGCCTTAAAGAGTTCCGGATTTGCCTGGAACTCAAGCCT 4585515
Query 119 ACCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCG 178
|| ||||||| |||||||| |||| || | |||||||||||||||| || |||
Sbjct 4585514 ACACGCTTAAACCGGGACAACCGTCGCCCGGCCAACATAGCCTTCTCCGTCCCCCCTTCG 4585455
Query 179 CATTAAC 185
|| ||||
Sbjct 4585454 CAGTAAC 4585448
Score = 104 bits (114), Expect = 2e-20
Identities = 136/187 (73%), Gaps = 5/187 (3%)
Strand=Plus/Minus
Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60
|||||||| ||||||| ||||||| |||||||| ||||| ||||| || | |
Sbjct 4741136 TTACCTGATGCTTAGAGGCTTTTCCTGGAAGCAGGGCATTTGTTACTTCAGCACCGTAGT 4741077
Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAA--TCCCGGATTTACCTAAGATTCCAGCCT 118
| |||||| ||| | | |||||||| | |||||||| ||| | || |||||
Sbjct 4741076 GC---CTCGTCGTCACGCCTCAGCCTTAGAGAGTTCCGGATTTGCCTGGAACTCAAGCCT 4741020
Query 119 ACCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCG 178
|| ||||||| |||||||| |||| ||| | |||||||||||||||| || |||
Sbjct 4741019 ACACGCTTAAACCGGGACAACCGTCGCCCGGCTAACATAGCCTTCTCCGTCCCCCCTTCG 4740960
Query 179 CATTAAC 185
|| ||||
Sbjct 4740959 CAGTAAC 4740953
Score = 98.7 bits (108), Expect = 1e-18
Identities = 135/187 (72%), Gaps = 5/187 (3%)
Strand=Plus/Minus
Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60
|||||||| ||||||| ||||||| |||||||| ||||| ||||| || | |
Sbjct 4454018 TTACCTGATGCTTAGAGGCTTTTCCTGGAAGCAGGGCATTTGTTACTTCAGCACCGTAGT 4453959
Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAA--TCCCGGATTTACCTAAGATTCCAGCCT 118
| |||||| ||| | | |||||||| | |||||||| ||| | || |||||
Sbjct 4453958 GC---CTCGTCGTCACGCCTCAGCCTTAGAGAGTTCCGGATTTGCCTGGAACTCAAGCCT 4453902
Query 119 ACCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCG 178
|| ||||||| |||||||| |||| || | |||||||||||||||| || |||
Sbjct 4453901 ACACGCTTAAACCGGGACAACCGTCGCCCGGCCAACATAGCCTTCTCCGTCCCCCCTTCG 4453842
Query 179 CATTAAC 185
|| ||||
Sbjct 4453841 CAGTAAC 4453835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518368547214
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |