Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq122 104 2e-20 >seq122 Length=4874392 Score = 104 bits (114), Expect = 2e-20 Identities = 136/187 (73%), Gaps = 5/187 (3%) Strand=Plus/Minus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60 |||||||| ||||||| ||||||| |||||||| ||||| ||||| || | | Sbjct 4585631 TTACCTGATGCTTAGAGGCTTTTCCTGGAAGCAGGGCATTTGTTACTTCAGCACCGTAGT 4585572 Query 61 GATAACTCGTCATCAGCTCCCGGCCTTA--GAATCCCGGATTTACCTAAGATTCCAGCCT 118 | |||||||||| | | |||||| || | |||||||| ||| | || ||||| Sbjct 4585571 GC---CTCGTCATCACGCCTCAGCCTTAAAGAGTTCCGGATTTGCCTGGAACTCAAGCCT 4585515 Query 119 ACCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCG 178 || ||||||| |||||||| |||| || | |||||||||||||||| || ||| Sbjct 4585514 ACACGCTTAAACCGGGACAACCGTCGCCCGGCCAACATAGCCTTCTCCGTCCCCCCTTCG 4585455 Query 179 CATTAAC 185 || |||| Sbjct 4585454 CAGTAAC 4585448 Score = 104 bits (114), Expect = 2e-20 Identities = 136/187 (73%), Gaps = 5/187 (3%) Strand=Plus/Minus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60 |||||||| ||||||| ||||||| |||||||| ||||| ||||| || | | Sbjct 4741136 TTACCTGATGCTTAGAGGCTTTTCCTGGAAGCAGGGCATTTGTTACTTCAGCACCGTAGT 4741077 Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAA--TCCCGGATTTACCTAAGATTCCAGCCT 118 | |||||| ||| | | |||||||| | |||||||| ||| | || ||||| Sbjct 4741076 GC---CTCGTCGTCACGCCTCAGCCTTAGAGAGTTCCGGATTTGCCTGGAACTCAAGCCT 4741020 Query 119 ACCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCG 178 || ||||||| |||||||| |||| ||| | |||||||||||||||| || ||| Sbjct 4741019 ACACGCTTAAACCGGGACAACCGTCGCCCGGCTAACATAGCCTTCTCCGTCCCCCCTTCG 4740960 Query 179 CATTAAC 185 || |||| Sbjct 4740959 CAGTAAC 4740953 Score = 98.7 bits (108), Expect = 1e-18 Identities = 135/187 (72%), Gaps = 5/187 (3%) Strand=Plus/Minus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60 |||||||| ||||||| ||||||| |||||||| ||||| ||||| || | | Sbjct 4454018 TTACCTGATGCTTAGAGGCTTTTCCTGGAAGCAGGGCATTTGTTACTTCAGCACCGTAGT 4453959 Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAA--TCCCGGATTTACCTAAGATTCCAGCCT 118 | |||||| ||| | | |||||||| | |||||||| ||| | || ||||| Sbjct 4453958 GC---CTCGTCGTCACGCCTCAGCCTTAGAGAGTTCCGGATTTGCCTGGAACTCAAGCCT 4453902 Query 119 ACCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCG 178 || ||||||| |||||||| |||| || | |||||||||||||||| || ||| Sbjct 4453901 ACACGCTTAAACCGGGACAACCGTCGCCCGGCCAACATAGCCTTCTCCGTCCCCCCTTCG 4453842 Query 179 CATTAAC 185 || |||| Sbjct 4453841 CAGTAAC 4453835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518368547214