Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq122 176 4e-42 >seq122 Length=4874392 Score = 176 bits (194), Expect = 4e-42 Identities = 112/122 (92%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 37 AGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCT 96 |||| | | | |||||||||||||| ||||| |||||||||||||||||||||||| | Sbjct 4454165 AGCTGAAGGCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGT 4454224 Query 97 GCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGA 156 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 4454225 GCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGA 4454284 Query 157 TG 158 || Sbjct 4454285 TG 4454286 Score = 176 bits (194), Expect = 4e-42 Identities = 112/122 (92%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 37 AGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCT 96 |||| | | | |||||||||||||| ||||| |||||||||||||||||||||||| | Sbjct 4585778 AGCTGAAGGCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGT 4585837 Query 97 GCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGA 156 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 4585838 GCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGA 4585897 Query 157 TG 158 || Sbjct 4585898 TG 4585899 Score = 176 bits (194), Expect = 4e-42 Identities = 112/122 (92%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 37 AGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCT 96 |||| | | | |||||||||||||| ||||| |||||||||||||||||||||||| | Sbjct 4741283 AGCTGAAGGCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGT 4741342 Query 97 GCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGA 156 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 4741343 GCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGA 4741402 Query 157 TG 158 || Sbjct 4741403 TG 4741404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476771071203