Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq122 571 1e-160
seq705 145 2e-32
>seq122
Length=4874392
Score = 571 bits (632), Expect = 1e-160
Identities = 388/431 (90%), Gaps = 6/431 (1%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4454476 CGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 4454417
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4454416 CTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 4454357
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT- 179
||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 4454356 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCTCCTTG 4454297
Query 180 -AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 4454296 CGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCAC 4454237
Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298
||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 4454236 TTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGA 4454177
Query 299 CCGGCATGAGCTTACGGAGCAAGT-CCTTCACCCTCAC--CGGCGCACCTTCTCCCGAAG 355
| | | | |||| ||||||| ||||| ||| || | ||| |||||||||||||
Sbjct 4454176 CTGCCTTCAGCTCCGTCAGCAAGTGACTTCA-CCTAACGACAGCGTGCCTTCTCCCGAAG 4454118
Query 356 TTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415
|||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 4454117 TTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 4454058
Query 416 TACCCAACCAC 426
|||| |||||
Sbjct 4454057 TACCTGACCAC 4454047
Score = 571 bits (632), Expect = 1e-160
Identities = 388/431 (90%), Gaps = 6/431 (1%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4586089 CGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 4586030
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4586029 CTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 4585970
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT- 179
||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 4585969 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCTCCTTG 4585910
Query 180 -AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 4585909 CGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCAC 4585850
Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298
||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 4585849 TTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGA 4585790
Query 299 CCGGCATGAGCTTACGGAGCAAGT-CCTTCACCCTCAC--CGGCGCACCTTCTCCCGAAG 355
| | | | |||| ||||||| ||||| ||| || | ||| |||||||||||||
Sbjct 4585789 CTGCCTTCAGCTCCGTCAGCAAGTGACTTCA-CCTAACGACAGCGTGCCTTCTCCCGAAG 4585731
Query 356 TTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415
|||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 4585730 TTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 4585671
Query 416 TACCCAACCAC 426
|||| |||||
Sbjct 4585670 TACCTGACCAC 4585660
Score = 571 bits (632), Expect = 1e-160
Identities = 388/431 (90%), Gaps = 6/431 (1%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4741594 CGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 4741535
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4741534 CTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 4741475
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT- 179
||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 4741474 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCTCCTTG 4741415
Query 180 -AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 4741414 CGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCAC 4741355
Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298
||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 4741354 TTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGA 4741295
Query 299 CCGGCATGAGCTTACGGAGCAAGT-CCTTCACCCTCAC--CGGCGCACCTTCTCCCGAAG 355
| | | | |||| ||||||| ||||| ||| || | ||| |||||||||||||
Sbjct 4741294 CTGCCTTCAGCTCCGTCAGCAAGTGACTTCA-CCTAACGACAGCGTGCCTTCTCCCGAAG 4741236
Query 356 TTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415
|||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 4741235 TTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 4741176
Query 416 TACCCAACCAC 426
|||| |||||
Sbjct 4741175 TACCTGACCAC 4741165
>seq705
Length=31904
Score = 145 bits (160), Expect = 2e-32
Identities = 201/278 (72%), Gaps = 9/278 (3%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| || | |||| ||| || ||| ||||||||||||| | | |||||||| |
Sbjct 10842 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGC 10901
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| | ||||| |||||| | | | ||| | | ||||| |||||||||||||||||
Sbjct 10902 ATCGTTAAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGA 10961
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186
|| | || | || ||||||| || | ||||| || |||| | || |||| ||||
Sbjct 10962 CCCTCATAGGTAAGGCCGCCATTAATCGGGGTGTCCTTCAAAACCT--CAGTTA-ATAAC 11018
Query 187 C-----CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTT 240
| ||| ||| || ||| || ||||||| | |||||| | |||| | | ||
Sbjct 11019 CAAGGAAAATCCGTTACCCAGCCGACATCGGGCAGACATCACACTCAATACTTTGATTTT 11078
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| | |||||||||||||||||||||| ||||||||||
Sbjct 11079 TTATCTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCG 11116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260721036096
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