Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq122 221 3e-55
seq705 84.2 5e-14
>seq122
Length=4874392
Score = 221 bits (244), Expect = 3e-55
Identities = 218/277 (79%), Gaps = 6/277 (2%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCC 58
||| | |||||||||| | || | ||||||||| |||||| || ||||||| || ||
Sbjct 4454470 TACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCC 4454411
Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118
| || ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 4454410 A--TCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 4454353
Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC-GATTGC-TC 176
|||||||||||||||||||||||||||| ||||||| | | ||||| ||||
Sbjct 4454352 GACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCTCCTTGCGGA 4454293
Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC 236
|||| | |||||||||| ||||||||||||||||| | ||||| || ||| |
Sbjct 4454292 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTC 4454233
Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273
| || ||| | |||||||||| |||||||| ||
Sbjct 4454232 GTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGC 4454196
Score = 221 bits (244), Expect = 3e-55
Identities = 218/277 (79%), Gaps = 6/277 (2%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCC 58
||| | |||||||||| | || | ||||||||| |||||| || ||||||| || ||
Sbjct 4586083 TACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCC 4586024
Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118
| || ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 4586023 A--TCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 4585966
Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC-GATTGC-TC 176
|||||||||||||||||||||||||||| ||||||| | | ||||| ||||
Sbjct 4585965 GACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCTCCTTGCGGA 4585906
Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC 236
|||| | |||||||||| ||||||||||||||||| | ||||| || ||| |
Sbjct 4585905 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTC 4585846
Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273
| || ||| | |||||||||| |||||||| ||
Sbjct 4585845 GTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGC 4585809
Score = 221 bits (244), Expect = 3e-55
Identities = 218/277 (79%), Gaps = 6/277 (2%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCC 58
||| | |||||||||| | || | ||||||||| |||||| || ||||||| || ||
Sbjct 4741588 TACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCC 4741529
Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118
| || ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 4741528 A--TCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 4741471
Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC-GATTGC-TC 176
|||||||||||||||||||||||||||| ||||||| | | ||||| ||||
Sbjct 4741470 GACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCTCCTTGCGGA 4741411
Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC 236
|||| | |||||||||| ||||||||||||||||| | ||||| || ||| |
Sbjct 4741410 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTC 4741351
Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273
| || ||| | |||||||||| |||||||| ||
Sbjct 4741350 GTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGC 4741314
>seq705
Length=31904
Score = 84.2 bits (92), Expect = 5e-14
Identities = 107/147 (73%), Gaps = 8/147 (5%)
Strand=Plus/Plus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64
|||| ||| | ||| ||||||||| ||| | || | ||||||| ||| ||||
Sbjct 10850 ATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGC----ATCG 10905
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
||| | | ||| ||| || | | | ||| | | ||||| ||||||||||||||||||| |
Sbjct 10906 TTAAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGACCCT 10965
Query 125 TATAGTTACGGCCGCCGTTTACTGGGG 151
|||| || ||||||| || | ||||
Sbjct 10966 CATAGGTAAGGCCGCCATTAATCGGGG 10992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062333461888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |