Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq122 167 5e-39
>seq122
Length=4874392
Score = 167 bits (184), Expect = 5e-39
Identities = 226/311 (73%), Gaps = 3/311 (1%)
Strand=Plus/Plus
Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGAT-TTCTAAC 88
|||||||| | | |||||| ||| |||| |||| | | || ||| |||||||
Sbjct 4454570 ACGCCAGTCTGCGTGGAGCCAACCTTGAAATACCACCCTT-TAACGTTTGATGTTCTAAC 4454628
Query 89 CGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCG 148
| | || ||| | ||| | ||||||||||| | ||| ||||||||||||||||||
Sbjct 4454629 CTGGCGCCGTG-ATCCGGCGTGGGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCT 4454687
Query 149 CCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGC 208
||||| ||||||||||||||| || | ||| | || | | || ||| | | || |
Sbjct 4454688 CCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTAGCTAATCACGGTCGGACATCGTGAGG 4454747
Query 209 ACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAG 268
||||||| |||| ||| | |||||||||| | | || |||||| ||||||
Sbjct 4454748 TTAGTGCAATGGCATAAGCTAGCTTGACTGCGAGAGTGACGGCTCGAGCAGGTGCGAAAG 4454807
Query 269 TCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTA 328
|| | || |||||||| ||| |||||||||| |||| |||||| ||||||||||| ||
Sbjct 4454808 CAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTA 4454867
Query 329 CCCTGGGGATA 339
| | |||||||
Sbjct 4454868 CTCCGGGGATA 4454878
Score = 167 bits (184), Expect = 5e-39
Identities = 226/311 (73%), Gaps = 3/311 (1%)
Strand=Plus/Plus
Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGAT-TTCTAAC 88
|||||||| | | |||||| ||| |||| |||| | | || ||| |||||||
Sbjct 4586183 ACGCCAGTCTGCGTGGAGCCAACCTTGAAATACCACCCTT-TAACGTTTGATGTTCTAAC 4586241
Query 89 CGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCG 148
| | || ||| | ||| | ||||||||||| | ||| ||||||||||||||||||
Sbjct 4586242 CTGGCGCCGTG-ATCCGGCGTGGGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCT 4586300
Query 149 CCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGC 208
||||| ||||||||||||||| || | ||| | || | | || ||| | | || |
Sbjct 4586301 CCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTAGCTAATCACGGTCGGACATCGTGAGG 4586360
Query 209 ACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAG 268
||||||| |||| ||| | |||||||||| | | || |||||| ||||||
Sbjct 4586361 TTAGTGCAATGGCATAAGCTAGCTTGACTGCGAGAGTGACGGCTCGAGCAGGTGCGAAAG 4586420
Query 269 TCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTA 328
|| | || |||||||| ||| |||||||||| |||| |||||| ||||||||||| ||
Sbjct 4586421 CAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTA 4586480
Query 329 CCCTGGGGATA 339
| | |||||||
Sbjct 4586481 CTCCGGGGATA 4586491
Score = 167 bits (184), Expect = 5e-39
Identities = 226/311 (73%), Gaps = 3/311 (1%)
Strand=Plus/Plus
Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGAT-TTCTAAC 88
|||||||| | | |||||| ||| |||| |||| | | || ||| |||||||
Sbjct 4741688 ACGCCAGTCTGCGTGGAGCCAACCTTGAAATACCACCCTT-TAACGTTTGATGTTCTAAC 4741746
Query 89 CGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCG 148
| | || ||| | ||| | ||||||||||| | ||| ||||||||||||||||||
Sbjct 4741747 CTGGCGCCGTG-ATCCGGCGTGGGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCT 4741805
Query 149 CCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGC 208
||||| ||||||||||||||| || | ||| | || | | || ||| | | || |
Sbjct 4741806 CCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTAGCTAATCACGGTCGGACATCGTGAGG 4741865
Query 209 ACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAG 268
||||||| |||| ||| | |||||||||| | | || |||||| ||||||
Sbjct 4741866 TTAGTGCAATGGCATAAGCTAGCTTGACTGCGAGAGTGACGGCTCGAGCAGGTGCGAAAG 4741925
Query 269 TCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTA 328
|| | || |||||||| ||| |||||||||| |||| |||||| ||||||||||| ||
Sbjct 4741926 CAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTA 4741985
Query 329 CCCTGGGGATA 339
| | |||||||
Sbjct 4741986 CTCCGGGGATA 4741996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982338472288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |