Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq122 114 2e-23 >seq122 Length=4874392 Score = 114 bits (126), Expect = 2e-23 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 ||| ||||| ||||| ||||||| || ||||||||||| || |||| ||||| || || Sbjct 3924498 GCCTGGTGCTGGCGCCTCTTCCACGACTTTCTGGTGACGGCGCTGCATGGAGCAGTCACG 3924439 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 || |||| | ||| |||| |||||| || || | || ||| || | ||| ||||| || Sbjct 3924438 TTCTGCCAGATAGATCGCGTTGCCCTGACCATCTGCCAATACCTGAATTTCGACGTGGCG 3924379 Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACCAT 209 ||||| ||||||||| |||| ||| ||||| Sbjct 3924378 AGGGTTTTCCAGGTACTTCTCCATGTACACCAT 3924346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735955344810