Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01001188.1
Length=621
Score E
Sequences producing significant alignments: (Bits) Value
seq122 535 2e-149
>seq122
Length=4874392
Score = 535 bits (592), Expect = 2e-149
Identities = 478/593 (81%), Gaps = 6/593 (1%)
Strand=Plus/Minus
Query 11 TTGGCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGAC 70
||||| || || || |||| | || |||| |||||||| || ||| ||||| |||
Sbjct 1114889 TTGGCGCGTGAGGTCGCCTGACG--GGATTTT-GAGGCGTTGGCGCTGAAGCGGCT-GAC 1114834
Query 71 GAAGGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTGC 130
|||||| | |||| ||| |||||||||| ||||| ||||||||| || |||||||| ||
Sbjct 1114833 GAAGGACT-GCAGTTCGTTGATCTGCGCTTTCTT-CTTGGCGTTATCAGACAGCAGACGC 1114776
Query 131 TCGCGGGACTGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAGC 190
||||| | |||||| || | ||||||||||||||||||||||||||| | | |||||||
Sbjct 1114775 TCGCGCGCCTGGGTTGCTGCCGTCATGTACTCGTCGTAGTTGCCCGGGTAAACGCGCAGC 1114716
Query 191 TCGCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGA 250
||||||||||| ||||| ||||||||||| || || ||||||||||||||||||||||
Sbjct 1114715 TCGCCGTAGTCGAGGTCGGCCATGTGGGTGCAGACCATGTTCAGGAAGTGACGGTCGTGC 1114656
Query 251 GAGATGATGATCATCAGGCTGGAACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTG 310
|| ||||||||||| |||| ||||| | |||| | | ||||||||||| |||||
Sbjct 1114655 GAAATGATGATCATGGTGCTGTTACGCTCGTTCAGCACCTGCTCCAGCCAGCGAATGGTA 1114596
Query 311 TTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGC 370
| |||||||| || |||||||||||||||||||| ||| | ||| || | || ||||||
Sbjct 1114595 TCGATGTCCAGGTTGTTGGTCGGTTCGTCGAGCAGCAGAATTTCCGGGTTAGAGAACAGC 1114536
Query 371 GCCTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCATCGGACCGAAG 430
||||| ||||||| || ||||| |||||||| || | |||||||||||||| ||| ||
Sbjct 1114535 GCCTGTGCCAGCAGCACGCGCAGTTTCCAGCCGGGAGCGACTTCGCTCATCGGGCCGTAG 1114476
Query 431 TGCTGCTCCAGCGGAATACCCAGACCCAGCAGCAGCTCACCGGCACGGGATTCGGCGGTG 490
|||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||||
Sbjct 1114475 TGCTGCTCCAGCGGAATACCCACGCCCAGCAGCAGCTCACCGGCACGCGCTTCTGCGGTG 1114416
Query 491 TAGCCGTCCATCTCGGCGAACTCGGTTTCCAGCTCGGCCACGGCCATGCCGTCTTCTTCG 550
||||||||||||||| | ||| ||| || || || || ||||||||||||
Sbjct 1114415 TAGCCGTCCATCTCGCCATACTTCTCTTCGAGGTCAGCGACTTTATAACCGTCTTCTTCG 1114356
Query 551 CTCATTTCCGGCAGCGAGTAAATACCATCACGCTCGGCCTTGACCTTCCACAG 603
||||| |||||||||| || || |||| ||||| |||| ||| ||||||
Sbjct 1114355 CTCATCTCCGGCAGCGCATAGATCGCATCGCGCTCTTCCTTCACCGCCCACAG 1114303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1881478472748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |