Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq122 535 2e-149 >seq122 Length=4874392 Score = 535 bits (592), Expect = 2e-149 Identities = 478/593 (81%), Gaps = 6/593 (1%) Strand=Plus/Minus Query 11 TTGGCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGAC 70 ||||| || || || |||| | || |||| |||||||| || ||| ||||| ||| Sbjct 1114889 TTGGCGCGTGAGGTCGCCTGACG--GGATTTT-GAGGCGTTGGCGCTGAAGCGGCT-GAC 1114834 Query 71 GAAGGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTGC 130 |||||| | |||| ||| |||||||||| ||||| ||||||||| || |||||||| || Sbjct 1114833 GAAGGACT-GCAGTTCGTTGATCTGCGCTTTCTT-CTTGGCGTTATCAGACAGCAGACGC 1114776 Query 131 TCGCGGGACTGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAGC 190 ||||| | |||||| || | ||||||||||||||||||||||||||| | | ||||||| Sbjct 1114775 TCGCGCGCCTGGGTTGCTGCCGTCATGTACTCGTCGTAGTTGCCCGGGTAAACGCGCAGC 1114716 Query 191 TCGCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGA 250 ||||||||||| ||||| ||||||||||| || || |||||||||||||||||||||| Sbjct 1114715 TCGCCGTAGTCGAGGTCGGCCATGTGGGTGCAGACCATGTTCAGGAAGTGACGGTCGTGC 1114656 Query 251 GAGATGATGATCATCAGGCTGGAACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTG 310 || ||||||||||| |||| ||||| | |||| | | ||||||||||| ||||| Sbjct 1114655 GAAATGATGATCATGGTGCTGTTACGCTCGTTCAGCACCTGCTCCAGCCAGCGAATGGTA 1114596 Query 311 TTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGC 370 | |||||||| || |||||||||||||||||||| ||| | ||| || | || |||||| Sbjct 1114595 TCGATGTCCAGGTTGTTGGTCGGTTCGTCGAGCAGCAGAATTTCCGGGTTAGAGAACAGC 1114536 Query 371 GCCTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCATCGGACCGAAG 430 ||||| ||||||| || ||||| |||||||| || | |||||||||||||| ||| || Sbjct 1114535 GCCTGTGCCAGCAGCACGCGCAGTTTCCAGCCGGGAGCGACTTCGCTCATCGGGCCGTAG 1114476 Query 431 TGCTGCTCCAGCGGAATACCCAGACCCAGCAGCAGCTCACCGGCACGGGATTCGGCGGTG 490 |||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct 1114475 TGCTGCTCCAGCGGAATACCCACGCCCAGCAGCAGCTCACCGGCACGCGCTTCTGCGGTG 1114416 Query 491 TAGCCGTCCATCTCGGCGAACTCGGTTTCCAGCTCGGCCACGGCCATGCCGTCTTCTTCG 550 ||||||||||||||| | ||| ||| || || || || |||||||||||| Sbjct 1114415 TAGCCGTCCATCTCGCCATACTTCTCTTCGAGGTCAGCGACTTTATAACCGTCTTCTTCG 1114356 Query 551 CTCATTTCCGGCAGCGAGTAAATACCATCACGCTCGGCCTTGACCTTCCACAG 603 ||||| |||||||||| || || |||| ||||| |||| ||| |||||| Sbjct 1114355 CTCATCTCCGGCAGCGCATAGATCGCATCGCGCTCTTCCTTCACCGCCCACAG 1114303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1881478472748