Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01001377.1 Length=151 Score E Sequences producing significant alignments: (Bits) Value seq122 102 6e-20 >seq122 Length=4874392 Score = 102 bits (112), Expect = 6e-20 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 1 CGAAAATTGCTGAAGATGCCATCGCCCAAGTGCGCGCCCAGGTCGGCACTGACAACGTAT 60 ||||||| ||||||||| | | | |||||| ||||| || | ||||| || Sbjct 3142755 CGAAAATCATCGAAGATGCCGTTGAACGCCTGCGCGAGCAGGTGGGTAACGACAAAGTGA 3142696 Query 61 TGCTTGGCCTGTCCGGCGGCGTTGACTCCTCGGTTGTAGCGGCACTGCTGCACAAGGCCA 120 | || |||||||||||||||||||||||||| || ||| ||||||||| || | Sbjct 3142695 TCCTCGGCCTGTCCGGCGGCGTTGACTCCTCCGTGACCGCGATGCTGCTGCACCGCGCGA 3142636 Query 121 TCGGCGACCAACTGACCTGCGTGTTTGTCGA 151 | ||||||| ||||||||||| |||||||| Sbjct 3142635 TTGGCGACCGTCTGACCTGCGTATTTGTCGA 3142605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383976701640