Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq871 87.8 1e-15
seq228 78.8 6e-13
seq183 73.4 2e-11
>seq871
Length=10861
Score = 87.8 bits (96), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 2374 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2318
Query 99 GGCAGGGACGTAAT 112
||||||||||||||
Sbjct 2317 GGCAGGGACGTAAT 2304
>seq228
Length=334299
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||||| |||| || | ||||||| ||||||||||| ||||||||||
Sbjct 80180 TCCGAA-GACCTCACTAAATCATT-CAATGGGTAGTA-GCGACGGGCGGCGTGTACAAAG 80124
Query 99 GGCAGGGACGTAAT 112
||||||||||||||
Sbjct 80123 GGCAGGGACGTAAT 80110
>seq183
Length=415644
Score = 73.4 bits (80), Expect = 2e-11
Identities = 56/64 (88%), Gaps = 2/64 (3%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||| |
Sbjct 263912 CTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGTTG 263969
Query 109 TAAT 112
||||
Sbjct 263970 TAAT 263973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300782338340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |