Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq122 176 9e-42
>seq122
Length=4874392
Score = 176 bits (194), Expect = 9e-42
Identities = 135/160 (84%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||||||||||| || | ||||||||||||||| |||||||||||||||||||||
Sbjct 4450918 GGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 4450859
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||||||||||| ||| |||||| | ||| |||||||| || |||| |||
Sbjct 4450858 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGAT 4450799
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160
||||| || |||| || ||| | |||| |||| ||||||
Sbjct 4450798 CGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATC 4450759
Score = 176 bits (194), Expect = 9e-42
Identities = 135/160 (84%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||||||||||| || | ||||||||||||||| |||||||||||||||||||||
Sbjct 4582532 GGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 4582473
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||||||||||| ||| |||||| | ||| |||||||| || |||| |||
Sbjct 4582472 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGAT 4582413
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160
||||| || |||| || ||| | |||| |||| ||||||
Sbjct 4582412 CGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATC 4582373
Score = 176 bits (194), Expect = 9e-42
Identities = 135/160 (84%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||||||||||| || | ||||||||||||||| |||||||||||||||||||||
Sbjct 4738036 GGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 4737977
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||||||||||| ||| |||||| | ||| |||||||| || |||| |||
Sbjct 4737976 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGAT 4737917
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160
||||| || |||| || ||| | |||| |||| ||||||
Sbjct 4737916 CGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATC 4737877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 998337470208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |