Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01001436.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq122 107 2e-21 >seq122 Length=4874392 Score = 107 bits (118), Expect = 2e-21 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 80 CTCGTTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAGAGACAAACGCCGCTGCCTC 139 || ||| ||||||||||||||||| || || |||||||| || ||||| || || || Sbjct 3683741 CTGGTTCAGCCACAGGCTGAAGGCATCTTTCACCACGCCGGAAACAAAGGCGGCGCACTG 3683800 Query 140 GCGGGACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCGGTTCCTGCATCTT 193 ||| || || |||||||| ||||||||||||| || ||||| |||||||| || Sbjct 3683801 GCGCGAAGAGAGGCGCTCTTTGGTCTGCCCGGCAAACTGCGGATCCTGCATTTT 3683854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534367576449