Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq122 223 8e-56 >seq122 Length=4874392 Score = 223 bits (246), Expect = 8e-56 Identities = 200/251 (80%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 2 GACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGCC 61 ||||||||||| || ||||||| || | ||||||||||||||||| |||||||| ||| Sbjct 3578109 GACGGCACCGGGCCGCTGTGGAAAGGGGCGCTGTTCCCGTTCCTGTTTATCACCATCGCC 3578168 Query 62 TGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCTC 121 || || || ||||| || ||||| ||||||||| |||| ||||| ||||| ||| |||| Sbjct 3578169 TGCGGTGCCGTCTCCGGCTTCCACGCGCTGATCGCCTCCGGCACTACGCCAAAGCTGCTG 3578228 Query 122 GCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGTG 181 ||| | || | | |||| || | || || ||||||| |||||||||||||| || ||| Sbjct 3578229 GCCTGCGAAACCGATGCGCGCTTTATTGGCTACGGCGCGATGCTGATGGAGTCCTTTGTG 3578288 Query 182 GCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAAC 241 || | |||||| |||| || || ||| | |||||||| ||| | ||||| ||||||||| Sbjct 3578289 GCGGTGATGGCGCTGGTGGCGGCATCGATTATTGAGCCGGGCCTCTACTTTGCCATGAAC 3578348 Query 242 AGCCCGGCTGC 252 | |||| |||| Sbjct 3578349 ACCCCGCCTGC 3578359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161527248992