Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01001545.1
Length=359
Score E
Sequences producing significant alignments: (Bits) Value
seq122 255 1e-65
>seq122
Length=4874392
Score = 255 bits (282), Expect = 1e-65
Identities = 272/359 (76%), Gaps = 0/359 (0%)
Strand=Plus/Minus
Query 1 CGAAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAAT 60
|||| |||| | |||| ||||| || ||||||||||| ||||||||||| || |||||||
Sbjct 4855072 CGAACTTCGACTCCTGACGCAGTGCAGGCAGGATGTTGACGTTCGGCGAGGCTTTGGAAT 4855013
Query 61 ACATGTAGCACACGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGC 120
|||||||||| | || |||||||| | ||||||||||||||||| ||||||||||| |
Sbjct 4855012 ACATGTAGCAGGCATAGCCGCTGCAGTAGCCGCAGAAGTTGCACGGCCCCATCTGCGCAC 4854953
Query 121 CATAGGGGTTGGTGTACGGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAAC 180
| |||| |||||| ||||| || ||||||||||| || ||||||| ||| || | ||| |
Sbjct 4854952 CGTAGGTGTTGGTATACGGGCCGGAGGTATTGGCAGAAGGCAGGTCGTACGGATGGTAGC 4854893
Query 181 CGACCTCGGCAGCGGCTTTCTGAAACAGCTGTGCGGAGACGGTGTTTTTCTGCGATTCCA 240
| | | || || | ||||||||| || ||| ||| ||||||| ||
Sbjct 4854892 CAATGCTTTCCGCCGCCTGGGCAAACAGCTGCGCCGAGTAAGTGCGCTTCTGCGCGGGCA 4854833
Query 241 AGGGGAACGGGTTGGAGCGGTCCGGGGCATACGGGTTGCCACCGCGACCTTCGCCCACCA 300
||||||||| ||||||||||||||||| |||||||||| || || | || ||||
Sbjct 4854832 GCGGGAACGGGCTGGAGCGGTCCGGGGCAAACGGGTTGCCTTTGCCGCCCTGACCGACCA 4854773
Query 301 ACTGGCCTTTGACGGTCCAGGCCTGGCCGGAGGTGCCGAAGACTTTTTCCGCGTAGTCG 359
| || || ||| ||||||| ||||| |||||||| || || || || | ||||
Sbjct 4854772 CTTTACCCTTTACGCTCCAGGCTGAACCGGAAGTGCCGAACACCTTCTCGGCCTGGTCG 4854714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046334463968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |