Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01001545.1 Length=359 Score E Sequences producing significant alignments: (Bits) Value seq122 255 1e-65 >seq122 Length=4874392 Score = 255 bits (282), Expect = 1e-65 Identities = 272/359 (76%), Gaps = 0/359 (0%) Strand=Plus/Minus Query 1 CGAAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAAT 60 |||| |||| | |||| ||||| || ||||||||||| ||||||||||| || ||||||| Sbjct 4855072 CGAACTTCGACTCCTGACGCAGTGCAGGCAGGATGTTGACGTTCGGCGAGGCTTTGGAAT 4855013 Query 61 ACATGTAGCACACGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGC 120 |||||||||| | || |||||||| | ||||||||||||||||| ||||||||||| | Sbjct 4855012 ACATGTAGCAGGCATAGCCGCTGCAGTAGCCGCAGAAGTTGCACGGCCCCATCTGCGCAC 4854953 Query 121 CATAGGGGTTGGTGTACGGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAAC 180 | |||| |||||| ||||| || ||||||||||| || ||||||| ||| || | ||| | Sbjct 4854952 CGTAGGTGTTGGTATACGGGCCGGAGGTATTGGCAGAAGGCAGGTCGTACGGATGGTAGC 4854893 Query 181 CGACCTCGGCAGCGGCTTTCTGAAACAGCTGTGCGGAGACGGTGTTTTTCTGCGATTCCA 240 | | | || || | ||||||||| || ||| ||| ||||||| || Sbjct 4854892 CAATGCTTTCCGCCGCCTGGGCAAACAGCTGCGCCGAGTAAGTGCGCTTCTGCGCGGGCA 4854833 Query 241 AGGGGAACGGGTTGGAGCGGTCCGGGGCATACGGGTTGCCACCGCGACCTTCGCCCACCA 300 ||||||||| ||||||||||||||||| |||||||||| || || | || |||| Sbjct 4854832 GCGGGAACGGGCTGGAGCGGTCCGGGGCAAACGGGTTGCCTTTGCCGCCCTGACCGACCA 4854773 Query 301 ACTGGCCTTTGACGGTCCAGGCCTGGCCGGAGGTGCCGAAGACTTTTTCCGCGTAGTCG 359 | || || ||| ||||||| ||||| |||||||| || || || || | |||| Sbjct 4854772 CTTTACCCTTTACGCTCCAGGCTGAACCGGAAGTGCCGAACACCTTCTCGGCCTGGTCG 4854714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046334463968