Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq871 176 5e-42 >seq871 Length=10861 Score = 176 bits (194), Expect = 5e-42 Identities = 158/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGC-ACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 1538 CTAGAAACCAACAAAATAGGATCGCGACGTCCTATTCTATTATTCCATGCTAATGTATTC 1479 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124 | || | |||||||||||||||||||||||| ||| ||||||||||||||||| || | Sbjct 1478 GAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCC-C 1420 Query 125 ACA-CCAATGAAGGCATACGGGCTCACCAAGAGGTAGGG-CTGGGTAATGCAGTACTCGC 182 ||| ||| ||||||| || || ||| ||| | || | | |||||||||| Sbjct 1419 ACAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGTCCAGCCGGACCAGTACTCGC 1360 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 1359 GGTGAGGCGGACC 1347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595163887542