Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01001645.1 Length=355 Score E Sequences producing significant alignments: (Bits) Value seq122 82.4 2e-13 >seq122 Length=4874392 Score = 82.4 bits (90), Expect = 2e-13 Identities = 152/222 (68%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 72 CCGCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACACCGCGCATT 131 ||||| |||||||||||| |||||||| ||| |||| ||| ||| || || | Sbjct 500698 CCGCCCGCCCTGGCGGTGCGTCTGCAGGAGATGTACGGCGAAGCGCACAATCCCAGCGTC 500757 Query 132 GCCGGCGGGCGC---CAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGGCCGGTG 188 |||| |||||| | | |||| || | ||||| |||||| ||| | ||| || Sbjct 500758 GCCGCAGGGCGCATTCCGCTGGTTC---TGGAGCTGCTATCCCCGGCGCAGCGCCCGCTG 500814 Query 189 CAGGTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAGAAGGAT 248 ||| | |||| ||||||||| |||||| | | ||| || ||| | || || Sbjct 500815 CAGATCACCCGCGATCTGGCGGCGTTCTGGAATGGGGCTTACCGGGAAGTGCAAAAAGAG 500874 Query 249 CTGAAGGGGCGGTATCCGAAGCATTATTGGCCGGATGATCCG 290 |||| ||||| || || || ||| ||||||||||| ||| Sbjct 500875 ATGAAAGGGCGCTACCCCAAACATCTGTGGCCGGATGACCCG 500916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1033535265632