Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01001645.1
Length=355
Score E
Sequences producing significant alignments: (Bits) Value
seq122 82.4 2e-13
>seq122
Length=4874392
Score = 82.4 bits (90), Expect = 2e-13
Identities = 152/222 (68%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 72 CCGCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACACCGCGCATT 131
||||| |||||||||||| |||||||| ||| |||| ||| ||| || || |
Sbjct 500698 CCGCCCGCCCTGGCGGTGCGTCTGCAGGAGATGTACGGCGAAGCGCACAATCCCAGCGTC 500757
Query 132 GCCGGCGGGCGC---CAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGGCCGGTG 188
|||| |||||| | | |||| || | ||||| |||||| ||| | ||| ||
Sbjct 500758 GCCGCAGGGCGCATTCCGCTGGTTC---TGGAGCTGCTATCCCCGGCGCAGCGCCCGCTG 500814
Query 189 CAGGTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAGAAGGAT 248
||| | |||| ||||||||| |||||| | | ||| || ||| | || ||
Sbjct 500815 CAGATCACCCGCGATCTGGCGGCGTTCTGGAATGGGGCTTACCGGGAAGTGCAAAAAGAG 500874
Query 249 CTGAAGGGGCGGTATCCGAAGCATTATTGGCCGGATGATCCG 290
|||| ||||| || || || ||| ||||||||||| |||
Sbjct 500875 ATGAAAGGGCGCTACCCCAAACATCTGTGGCCGGATGACCCG 500916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1033535265632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |