Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01001688.1
Length=394
Score E
Sequences producing significant alignments: (Bits) Value
seq122 147 5e-33
>seq122
Length=4874392
Score = 147 bits (162), Expect = 5e-33
Identities = 276/401 (69%), Gaps = 15/401 (4%)
Strand=Plus/Minus
Query 3 ATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTTGA 62
|||||||||| ||||||||||| | ||||| ||||| || || ||||||||||| |
Sbjct 742264 ATGGTCAGCAGATCGCCGCCCACTTCCGTCCATGCCAGACCGGTCACCTGACCGACGCGG 742205
Query 63 TCCT-GCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGGA 121
| | |||| ||||| | |||||| ||| |||| |||||||| | | |||
Sbjct 742204 TTTTCGCTG-TCGGCACGACCGTAGTCGAAACGCTGCACCCCGAGGAAATCTTTCAGATT 742146
Query 122 GTCGGCCGTGACCTTCACCGAGAAGCGT-------TTTTCCAGC-GCATGTTCCTTGACC 173
|||||| ||| | ||| | | | || |||| | ||| | | || |||
Sbjct 742145 GTCGGCGTTGATTT----CGATATGTTTGATCGACTTATCCATCAGCAGGGTT-TTCACC 742091
Query 174 GCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTG 233
||||| ||||| | ||| | | | ||||| |||| |||||| || ||||| ||||||
Sbjct 742090 GCCTTACGGCACAGCTTGGACAGTTCACGCTCAAGGCTACGCACGCCCGCTTCACGGGTG 742031
Query 234 TAGTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGG 293
||||| || | |||| | ||| | || | | || | | ||| ||||||||
Sbjct 742030 TAGTAACGAATGATGCCAACGATGGCGCTGTCGTCCACGGTCAGCTCATTTTTCTTCAGC 741971
Query 294 CCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCT 353
||||| | ||||||||||| | |||| || | || || |||| || |||||
Sbjct 741970 GCATTGCGCTCAATCTGCTTGGACAGCAGGTGCTGCTTAGCAATATTGAGTTTTTCGTCC 741911
Query 354 TCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394
|||||||| || | |||||||||||||||||| || |||||
Sbjct 741910 TCGGTGTAGCCGGACAGGCGAATCACTTCCATACGATCCAG 741870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158327449408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |