Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01001690.1
Length=455
Score E
Sequences producing significant alignments: (Bits) Value
seq122 251 2e-64
>seq122
Length=4874392
Score = 251 bits (278), Expect = 2e-64
Identities = 311/423 (74%), Gaps = 8/423 (2%)
Strand=Plus/Plus
Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62
||||||||||||||||| || || ||||| | || ||||| || |||||||| || ||
Sbjct 3916927 ATCAGGAACACTTCACGTGCCCCAGCGCCCTGCGCGGATTCGCGAATGGCACGGCGTTCG 3916986
Query 63 ACCTGGGT-GGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACT 121
||||| || | || | | ||| || || | |||||| || ||||| || ||| ||| ||
Sbjct 3916987 ACCTGAGTCGCACCTAC-CGGTACACACACCAGCACGCGCGGGCTTGGGCGCATGAAGCT 3917045
Query 122 GTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGC 181
||| |||||||| ||||| |||| ||||||||| || ||| ||| |||||||||
Sbjct 3917046 GTTGCTGTGAACCTGTTTGATAAAGTGCTGCAGCATTTTTTCGGTGACAAAGAAGTCGGC 3917105
Query 182 GATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCAT 241
||| ||||| |||||||| || ||||| || || |||||||| || ||||| || |||||
Sbjct 3917106 GATAACGCCATCTTTCATTGGGCGAATAGCTGCGATATTGCCGGGGGTACGACCCAGCAT 3917165
Query 242 GCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACC------ATGGGTCCG 295
| ||||| || ||||| || | || ||||| | ||| || ||
Sbjct 3917166 CTGTTTGGCGTCATGACCGACTGCCGCCACGCTTTTAGGGGAACCGGCACGATCCTGACG 3917225
Query 296 AATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGT 355
|| || || || || |||||||| || || || || || | ||||||||| |||||
Sbjct 3917226 GATAGCAACGACGGAAGGCTCATTAAGAACAATGCCCTGCCCTTTCACGTAAATCAGGGT 3917285
Query 356 GTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAA 415
||||| || |||||||| ||||| | ||| |||||||||||||||| | ||| || ||
Sbjct 3917286 ATTGGCGGTACCCAGGTCGATGGACAAGTCGTTGGAAAACATGCCACGGAATTTTTTAAA 3917345
Query 416 CAT 418
|||
Sbjct 3917346 CAT 3917348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1353515224032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |