Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01001757.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq122 147 5e-33 >seq122 Length=4874392 Score = 147 bits (162), Expect = 5e-33 Identities = 194/269 (72%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 147 TCACCGGCAGCGCGGGCCACGGCGAGGATCATGCCGGTCGTCATGGCCGGGCTTGCCATG 206 || ||||| ||||| || ||||| || |||| |||||| ||| ||||| |||| Sbjct 3111754 TCCCCGGCGGCGCGCGCGACGGCCAGAATCAGCCCGGTCAGCATCGCCGGTAACGCCAGC 3111813 Query 207 GGCAAGACGATCTTCCACAGCGTCTCGGCCTTGGTCGCGCCCAAGGCCAGCGAGCCCTCG 266 |||| || | |||||| ||||| ||| || ||||| | || || ||||||| | Sbjct 3111814 GGCAGCGTGACGTGCCACAGGGTCTCTGCCCGCGTTGCGCCGAGCGCGAGGGAGCCCTGG 3111873 Query 267 CGCACGGTACGCGGAATACGCGCCAAACCTTCTTCGGTGGCCACGATCACCACCGGAACA 326 |||| | ||||||| |||| || || ||||||||||| || || |||||||| | Sbjct 3111874 CGCAGCGAGGGCGGAATGCGCGACAGTCCCTCTTCGGTGGCAACAATTACCACCGGCAGG 3111933 Query 327 GCCAGCAGTGCCAGGGTCAACGATGCCCACAGCAGGTCCGGGGTACCCAAGGTCGGCGCC 386 | |||||| ||||| |||| ||| ||||||||||| |||| ||||| ||||| || | Sbjct 3111934 GTCAGCAGAGCCAGCGTCAGCGAAGCCCACAGCAGCCCCGGTGTACCAAAGGTTGGGTTC 3111993 Query 387 GGCAGTGCTTCGGGGAAGACCAAGCGGTC 415 || | | || ||||| || |||||| Sbjct 3111994 GGTAACGACGAGGCGAAGAACAGGCGGTC 3112022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241522238592