Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq122 159 3e-37
>seq122
Length=4874392
Score = 159 bits (176), Expect = 3e-37
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||||| | ||||||||||||| |||||| || | | ||| | ||||||
Sbjct 4451842 TCGAGTTGCAGACTCCGATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCG 4451783
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || | || |||||| |||||||| ||||||| |||||| || |||||||||
Sbjct 4451782 AGGTCGCTTCTCTTTGTATGCGCCATTGTAGCACGTGTGTAGCCCTGGCCGTAAGGGCCA 4451723
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| |||||||||||||||||||||||||||||||| ||||
Sbjct 4451722 TGATGACTTGACGTCATCCCCACCTTCCTCCGGTTTATCAC 4451682
Score = 159 bits (176), Expect = 3e-37
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||||| | ||||||||||||| |||||| || | | ||| | ||||||
Sbjct 4583456 TCGAGTTGCAGACTCCGATCCGGACTACGACGCACTTTATGAGGTCCGCTTGCTCTCGCG 4583397
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || | || |||||| |||||||| ||||||| |||||| || |||||||||
Sbjct 4583396 AGGTCGCTTCTCTTTGTATGCGCCATTGTAGCACGTGTGTAGCCCTGGCCGTAAGGGCCA 4583337
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| |||||||||||||||||||||||||||||||| ||||
Sbjct 4583336 TGATGACTTGACGTCATCCCCACCTTCCTCCGGTTTATCAC 4583296
Score = 159 bits (176), Expect = 3e-37
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||||| | ||||||||||||| |||||| || | | ||| | ||||||
Sbjct 4738960 TCGAGTTGCAGACTCCGATCCGGACTACGACGCACTTTGTGAGGTCCGCTTGCTCTCGCG 4738901
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || | || |||||| |||||||| ||||||| |||||| || |||||||||
Sbjct 4738900 AGGTCGCTTCTCTTTGTATGCGCCATTGTAGCACGTGTGTAGCCCTGGCCGTAAGGGCCA 4738841
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| |||||||||||||||||||||||||||||||| ||||
Sbjct 4738840 TGATGACTTGACGTCATCCCCACCTTCCTCCGGTTTATCAC 4738800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415974760110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |