Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq122 170 1e-40
>seq122
Length=4874392
Score = 170 bits (188), Expect = 1e-40
Identities = 121/139 (87%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 4454867 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTG 4454808
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||||| |||||| || || |||||||| |||||| ||| |||||||||||||
Sbjct 4454807 CTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGTCAAGCTAGCTTATGCCATTGCACTAA 4454748
Query 121 CACTACGATTTCCGACCGT 139
| ||||| |||||||||
Sbjct 4454747 CCTCACGATGTCCGACCGT 4454729
Score = 170 bits (188), Expect = 1e-40
Identities = 121/139 (87%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 4586480 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTG 4586421
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||||| |||||| || || |||||||| |||||| ||| |||||||||||||
Sbjct 4586420 CTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGTCAAGCTAGCTTATGCCATTGCACTAA 4586361
Query 121 CACTACGATTTCCGACCGT 139
| ||||| |||||||||
Sbjct 4586360 CCTCACGATGTCCGACCGT 4586342
Score = 170 bits (188), Expect = 1e-40
Identities = 121/139 (87%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 4741985 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTG 4741926
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||||| |||||| || || |||||||| |||||| ||| |||||||||||||
Sbjct 4741925 CTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGTCAAGCTAGCTTATGCCATTGCACTAA 4741866
Query 121 CACTACGATTTCCGACCGT 139
| ||||| |||||||||
Sbjct 4741865 CCTCACGATGTCCGACCGT 4741847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351979332100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |