Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq122 170 1e-40 >seq122 Length=4874392 Score = 170 bits (188), Expect = 1e-40 Identities = 121/139 (87%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 4454867 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTG 4454808 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||||| |||||| || || |||||||| |||||| ||| ||||||||||||| Sbjct 4454807 CTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGTCAAGCTAGCTTATGCCATTGCACTAA 4454748 Query 121 CACTACGATTTCCGACCGT 139 | ||||| ||||||||| Sbjct 4454747 CCTCACGATGTCCGACCGT 4454729 Score = 170 bits (188), Expect = 1e-40 Identities = 121/139 (87%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 4586480 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTG 4586421 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||||| |||||| || || |||||||| |||||| ||| ||||||||||||| Sbjct 4586420 CTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGTCAAGCTAGCTTATGCCATTGCACTAA 4586361 Query 121 CACTACGATTTCCGACCGT 139 | ||||| ||||||||| Sbjct 4586360 CCTCACGATGTCCGACCGT 4586342 Score = 170 bits (188), Expect = 1e-40 Identities = 121/139 (87%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 4741985 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTG 4741926 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||||| |||||| || || |||||||| |||||| ||| ||||||||||||| Sbjct 4741925 CTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGTCAAGCTAGCTTATGCCATTGCACTAA 4741866 Query 121 CACTACGATTTCCGACCGT 139 | ||||| ||||||||| Sbjct 4741865 CCTCACGATGTCCGACCGT 4741847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351979332100