Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01001946.1
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
seq122 273 2e-71
>seq122
Length=4874392
Score = 273 bits (302), Expect = 2e-71
Identities = 154/156 (99%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4454855 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 4454796
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4454795 CTCGAGCCGTCACTCTCGCAGTCAAGCTAGCTTATGCCATTGCACTAACCTCACGATGTC 4454736
Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179
||||||||||||||| ||||||||||||||||||||
Sbjct 4454735 CGACCGTGATTAGCTAACCTTCGTGCTCCTCCGTTA 4454700
Score = 273 bits (302), Expect = 2e-71
Identities = 154/156 (99%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4586468 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 4586409
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4586408 CTCGAGCCGTCACTCTCGCAGTCAAGCTAGCTTATGCCATTGCACTAACCTCACGATGTC 4586349
Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179
||||||||||||||| ||||||||||||||||||||
Sbjct 4586348 CGACCGTGATTAGCTAACCTTCGTGCTCCTCCGTTA 4586313
Score = 273 bits (302), Expect = 2e-71
Identities = 154/156 (99%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4741973 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 4741914
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4741913 CTCGAGCCGTCACTCTCGCAGTCAAGCTAGCTTATGCCATTGCACTAACCTCACGATGTC 4741854
Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179
||||||||||||||| ||||||||||||||||||||
Sbjct 4741853 CGACCGTGATTAGCTAACCTTCGTGCTCCTCCGTTA 4741818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 473571265356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |