Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01002049.1 Length=571 Score E Sequences producing significant alignments: (Bits) Value seq122 105 2e-20 >seq122 Length=4874392 Score = 105 bits (116), Expect = 2e-20 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 4 TCGACCGTCGAGTTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTC 63 || ||||| | |||| |||| ||||| || | ||| | | |||| | ||||||||| | Sbjct 881410 TCCACCGTGGTGTTCTGGTCATTCCGCGTGATGGTGGCGCTGGGCATGCTGATGATCCTG 881351 Query 64 ACCGGTCTAGTTCAGCCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGT 123 || | ||| |||| |||| | ||| || || | |||| || || | | Sbjct 881350 TTGGGCGTGGTT-AGCCTGTGGAT-GCGTCGCGGACAGCGTCTGTATACCTCGCGTGCAT 881293 Query 124 TCCTGTACCTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGT 183 |||||| | | | || |||||| || || || |||| ||| | |||| |||||| Sbjct 881292 TCCTGTGGTTTGTGCTGCTGATGGGGCCATCAGGTCTGATTGCGCTGGTCGCAGGCTGGA 881233 Query 184 TCACCACGGAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCAC 235 ||||||| ||||| || |||||||||||||| ||||||||||| ||||||| Sbjct 881232 TCACCACCGAAATGGGTCGTCAGCCGTGGGTCATCTACGGCCTGCTGCGCAC 881181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1724691975776