Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq122 125 1e-26 >seq122 Length=4874392 Score = 125 bits (138), Expect = 1e-26 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155 || ||||| ||||| | | || | || ||||| ||||| ||||||| ||||| ||||| Sbjct 3206441 GCCAGGAACGCTTCCT-GCGGCAACTCAACGTTACCCACCTGCTTCATACGTTTCTTACC 3206499 Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215 | | || || |||| |||||||| ||||||||| ||||||||||| ||||| || || Sbjct 3206500 GTCTTTCTGTTTCTGCAGCAGCTTTTTCTTACGGCTGACGTCACCGCCATAGCACTTAGC 3206559 Query 216 CAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGC 275 ||| ||||| || | || || || | | || ||||| || || ||||||||| Sbjct 3206560 CAGCACGTTTTTACGCAGCTGTTTCACCGTTGAACGGGCAATAATATGGTTGCCAATGGC 3206619 Query 276 GGCCTGGATCGCGACGTCG 294 ||||| ||||||| |||| Sbjct 3206620 CGCCTGAATCGCGATGTCG 3206638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838347491008