Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq122 125 1e-26
>seq122
Length=4874392
Score = 125 bits (138), Expect = 1e-26
Identities = 148/199 (74%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155
|| ||||| ||||| | | || | || ||||| ||||| ||||||| ||||| |||||
Sbjct 3206441 GCCAGGAACGCTTCCT-GCGGCAACTCAACGTTACCCACCTGCTTCATACGTTTCTTACC 3206499
Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215
| | || || |||| |||||||| ||||||||| ||||||||||| ||||| || ||
Sbjct 3206500 GTCTTTCTGTTTCTGCAGCAGCTTTTTCTTACGGCTGACGTCACCGCCATAGCACTTAGC 3206559
Query 216 CAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGC 275
||| ||||| || | || || || | | || ||||| || || |||||||||
Sbjct 3206560 CAGCACGTTTTTACGCAGCTGTTTCACCGTTGAACGGGCAATAATATGGTTGCCAATGGC 3206619
Query 276 GGCCTGGATCGCGACGTCG 294
||||| ||||||| ||||
Sbjct 3206620 CGCCTGAATCGCGATGTCG 3206638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 838347491008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |