Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01002110.1
Length=382
Score E
Sequences producing significant alignments: (Bits) Value
seq122 149 1e-33
>seq122
Length=4874392
Score = 149 bits (164), Expect = 1e-33
Identities = 152/196 (78%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 151 TGACTTCCAGCATGCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATACA 210
|||| || |||| | || | || || |||||||| | || |||| |||||| ||||
Sbjct 3644897 TGACGTCGAGCACCCTGGCAATATTTTCCGCGCGCTCTAAATAGCGCGCCATCCAGTACA 3644956
Query 211 GATCTGCAGCTGTTCTACGCAGCATAC-TCAGCCCTCCACCACCCAGGTGTCCTTGGTTC 269
| | || || | | ||||| | ||| || |||| ||||||||||||||||| |
Sbjct 3644957 GGCCACTGGCCGTGCGGCTTAGCATGCGTCATCC-TCCAGAACCCAGGTGTCCTTGGTCC 3645015
Query 270 CACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGC 329
||||||| ||||| ||||| || |||||||||||||| ||||||||||||||||||| |
Sbjct 3645016 CACCGCCCTGCGAGGAGTTAACCACCAGCGAGCCTTCGTTCAGCGCCACGCGGGTCAGCC 3645075
Query 330 CACCGGGCACCAGGCG 345
||||||||||||| ||
Sbjct 3645076 CACCGGGCACCAGCCG 3645091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1119929854400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |